Pseudomonas taeanensis MS-3, TMS3_RS0121370
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taeanensis MS-3 contig_09, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGTCAGACGGCTGGCGTGATGGGCTTTATCGAGGGCGCCCAGGCGCAGGGCGCGAAGCTGGTGTGTGGTGGCGAGCGCCTGAGCATCAACGGCTCGAG CAACTTCGTGCAGCCCACGCTATTTACCGGGGTCAGCGCCGAGATGCGTCTGGCCCGTGAGGAAGTGTTCGGCCCGGTACTGGCAATCAGTGCCTTCGAT GACGAAGACCAGGCCGTGAGCCTGGCCAACGACAGCATCTACGGACTGGCTGCATCGCTATGGAGTGACGACCTCAATCGCGCTCACCGCGTCGCCCGCC GGCTAAACGCCGGCACGGTGTCGGTCAATACGGTGGACGCTCTGGATGTGACAGTGCCGTTCGGCGGCGGCAAGCAGTCCGGTTTCGGTCGCGACCTGTC GCTGCATTCCTTCGATAAGTACACCCAGCTGAAAACCACCTGGTTTCAGTTGCGTTAATCCGCAAGGGCATCCCCTACAACTACAAAAGAGGGTGAAACA
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| DNA Sequence for Gene |
>TMS3_RS0121370
ATGACGCAGGATATAAGTGTTCCGCTGCAAGGTGCGGCCGCCGCACCACGGGTAAAGGGCGCGCGCAAAGCGCTGGGCCTGGGTTCCCTGCTGGCCGTGG CCATTGGCCTGGTGGTGTCGCAAGGGGTGATGGTGCTGATGCTGCAAGGCGCGGGTATTGCCGGCTTGGGCTTTATCGTGCCGCTGGGCCTGGCCTATCT GCTGGCCCTGAGCTACGCCTTTTCCTTTTCCGAATTGGCATTGATGATCCCGCGTGCCGGCAGCCTGAGCAGCTATACCGAGGTCGCGATTGGTCAGTTT CCGGCGATCCTGGCGACCTTCTCCGGTTACATAGTGGTGGCGATGTTCGCCCTGTCGGCCGAGTTGCTGCTACTCGATCTGATCATTGGCAAGGTCTACC CGCATGCCTTGCCGTCGATGACGGTGGCCTTCGGCGTGCTGGCCCTGTTCACCGTGCTTAACCTGCTGAATATCGATATCTTCGCCCGCCTGCAGTCCGT ACTGGCGCTGGTGATGGTGGTGGTGTTGCTGTTGCTCGGGTTTAGCGCGGTCGGTCACGAGAACGCCGCTCCCATCGCCAGCCTCAGTCTGGAGGGCTGG AACCCCATGGGCTTCGGTGTACTGGCGCTTACTGCGCTGGCTATCTGGGGATTCGTCGGCGCCGAATTCGTCTGCCCGCTGGTGGAAGAGTCGCGTCGGC CGGAGCGCAATATTCCGCGCTCGATGATCATCGGTGTGAGTGTGATTTTCTTCACCATCAGCCTCTACTGCCTGGGCGCACTGCTGATGGTGCCGCAGGA AGAACTGGCCAGTAACGGTTTGCCGCATTACCTGTTCGCCACTGCGGTATTCGGCGAGACGGGGCAGCTGTTGTTGGTCACCGCTGCCATCACCGCTACC TGCAGCACGCTCAACACCTCGTTGGCGGCTATCCCGCGCATGCTCAGTGGCATGGCGCACAATGGTCAGGCGTTTCCTTGTTTCAAACGTCTCAGCGCAC GTACCGGCGCACCCTGGGTGGCCGTATTGTTTGTCGCCGCCATCACCGGCTTGCCGGTTCTGCTGATGGGTGTCGATTCGATCAATCTGTTGCTGATCGC CGCCGCGCTGGCCTGGTTGCTGGCCTACATCATCGTCCATGTCGATGTGATCGTCCTGCGTCTGCGCTACCCGGACCTGGCCCGACCGTTCCGCACACCG TTCTACCCGCTGCCGCAGGTGATCGGTATCGTCGGCATGCTCTATGCCGTGTGGCACGCCTCGCCATCGCCCGAGTTGACTCTGCAGATTTTCGCCAGCG CCGGAGTGGTGCTGGGGATCGTCTCGCTGATCGCGGTGCTGTGGATCAAGTTGGTGATGCGCAAGCCCCTGTTCACCCCGGAGCCAATCGAGAAGGCGTT GAACCCGGACCAAGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGACCGTATACGGTCGTAGAGTGATGCCCCCTGACGGGGAGGAGAGATGTAATGAATGCGCAAATCAAGCCAAACCGTGAAACCCGTGACTATCAGGCCC TGGATGCCGCCCACCACATCCATGGCTTCGTCGACCAGAAGGCGCTGAATGCCGAAGGCCCGCGGGTGATGGTCAAAGGCGAGGGCTTGTACCTCTGGGA TAACGACGGCAACCGCTACCTCGACGGCATGTCCGGCCTGTGGTGCACCAATCTCGGTTACGGGCGCAAGGACCTCACTGCCGCCGCGACTCGGCAGATG GAGCAACTGGCCTACTACAACATGTTCTTCCACACCACCCACCCGGCGGTGGTGGAACTGTCCGAGCTGCTGTTCAGCCTGTTGCCCGGCCACTACAGCC ATGCCATCTATACCAACTCGGGCTCCGAGGCCAACGAGGTGCTGATCCGCACGGTACGGCGCTACTGGCAGATTCTCGGCAAGCCAGAGAAGAAGGTGAT
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| Amino Acid Sequence |
>amino acid transporter
MTQDISVPLQGAAAAPRVKGARKALGLGSLLAVAIGLVVSQGVMVLMLQGAGIAGLGFIVPLGLAYLLALSYAFSFSELALMIPRAGSLSSYTEVAIGQF PAILATFSGYIVVAMFALSAELLLLDLIIGKVYPHALPSMTVAFGVLALFTVLNLLNIDIFARLQSVLALVMVVVLLLLGFSAVGHENAAPIASLSLEGW NPMGFGVLALTALAIWGFVGAEFVCPLVEESRRPERNIPRSMIIGVSVIFFTISLYCLGALLMVPQEELASNGLPHYLFATAVFGETGQLLLVTAAITAT CSTLNTSLAAIPRMLSGMAHNGQAFPCFKRLSARTGAPWVAVLFVAAITGLPVLLMGVDSINLLLIAAALAWLLAYIIVHVDVIVLRLRYPDLARPFRTP FYPLPQVIGIVGMLYAVWHASPSPELTLQIFASAGVVLGIVSLIAVLWIKLVMRKPLFTPEPIEKALNPDQV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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