Strain | Pseudomonas taeanensis MS-3 contig_06, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGACCTGTCCCTGGGTGAGTACTCCGACGTGGGTAGCATCATCGAGCAGTTCGCCTCCGAGCACGCCACAGTCAAAGTGGGTACCGTGATCGATCCGGA TATGCGTGAAGAGTTGCACGTGACCGTGGTTGCCACTGGTCTGGGCGCGCGCATTGAAAAGCCGGTAAAAGTAGTCGATAACACCATGCAAGTCGCGGCC ACTTCGTCGACCCCGGCGGCTCCGGCAACGCCTTCGCGCAGCGAGCAGAGTGTCAACTACAAGGACTACGAACGGCCTACCGTACAGCGCCAGAGCCATT CCGGTGCAGCTACTGCGGCCAAGCTGAATGCGCACGATGACCTGGATTATCTGGACATCCCAGCGTTCCTGCGTCGGCAGGCTGATTGATGGAGTGTATC AGGGGCATTGGTTCGATTGGTGTTCAGCAAGGGCCGGTTCTGCTATTATCGCCGGCCATTGTTGAAAACAATTCGCAACTAGCGCTATAGCGGCCAAGCC
|
|
DNA Sequence for Gene |
>TMS3_RS0119225
ATGATCAGACAACGCACCCTGAAGAACATTATCCGCGCCACTGGCGTTGGCCTGCATTCCGGGGAGAAGGTATACCTGACCCTGAAGCCGGCACCCGTGG ACACCGGTATCGTGTTCCGTCGTACCGACCTAGATCCCGTGGTGGAAATTCCCGCGCGGGCGAGCAATGTCGGTGAAACCACCATGTCGACCACCTTGGT CAATGGTGACGTCAAGGTGGATACGGTAGAGCACCTGCTTTCGGCCATGGCTGGCCTGGGTATCGATAACGCCTACGTCGAGCTCTCCGCGTCCGAAGTA CCGATCATGGATGGCAGTGCCGGTCCTTTTGTATTCCTGATTCAATCTGCTGGTTTGCAAGAGCAGGAAGCCCATAAGAAGTTCATCCGCATCATCCGCG AAGTCACGGTTGAAGAAGGCGACAAGCGCGCCACCTTCGTGCCTTTCGAGGGATTCAAGGTGAGTTTCGAGATCGATTTCGATCATCCGGTTTTCCGCAA TCGCACCCAGTCGGCCAGTGTAGATTTTTCCAGCACCTCTTTCGTCAAGGAGGTCAGCCGGGCGCGTACCTTCGGTTTCATGCGTGACATCGAGTTCCTC CGTTCACAGAACCTGGCGCTCGGCGGCAGCGTAGACAACGCTATTGTGGTGGATGAGTACCGTGTATTGAACGAAGACGGCCTGCGTTATGAGGACGAGT TCGTCAAACACAAGATTCTCGATGCCATTGGTGACCTCTACCTGCTAGGGAATAGCTTGATTGGTGAGTTCCGTGGCTTCAAGTCCGGACATGCACTGAA CAACCTTCTGCTGCGCACCTTGATCGAGCAGACGGATGCCTGGGAAATGGTCACCTTCGACGACGCCAAGACTGCACCCATTTCCTATATGCGCCCGGCT GCGGCCGTGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCAAGACTCTCTTCCTTTCTGATTCGAGGCCACCTTGGGGTGGCCTCTTTTTTTGGGGATGTGTCTTGATCGCGCAAAAGTGCAGGTTGCGGCTTACTCG CTGGGGTTTCCGTGCTTGGCCAGGCGCTCCAGCGCGGCACGCAATTTAGGGTCGCGAACGCCCTCGGCGGTCGCCTGGATGTTCTCGGCAGCGCTGCTGG ACAAGCTAATAGTGCGACCGACTGCACGCCTTTCGGCGGCCGGTGGTTGCACCTTGAAGAGGATTTTCGCTAAGGTCGCGAACTCTTCGAGCGCCTGCAG TTGTTTGAGCAGGCGCCGCTGTTGATAGCGTAAGCGGGTGGCCCAGTGGCCATCGGTAACGATAAGAAGCAGGCAGCCCTCACGCCAGAACGCGACATGG CAGTGTTCGCGGGCCGCAGGTTGCAGCTGGCTTTCCACTAAGCGTTGCAGGTGATCGAGGCGTTGCGCCTGATTGAATAACGCTTTCAAGGGCTTCGCTT
|
|
Amino Acid Sequence |
>UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
MIRQRTLKNIIRATGVGLHSGEKVYLTLKPAPVDTGIVFRRTDLDPVVEIPARASNVGETTMSTTLVNGDVKVDTVEHLLSAMAGLGIDNAYVELSASEV PIMDGSAGPFVFLIQSAGLQEQEAHKKFIRIIREVTVEEGDKRATFVPFEGFKVSFEIDFDHPVFRNRTQSASVDFSSTSFVKEVSRARTFGFMRDIEFL RSQNLALGGSVDNAIVVDEYRVLNEDGLRYEDEFVKHKILDAIGDLYLLGNSLIGEFRGFKSGHALNNLLLRTLIEQTDAWEMVTFDDAKTAPISYMRPA AAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|