Pseudomonas taeanensis MS-3, TMS3_RS0119140
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taeanensis MS-3 contig_06, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCTCCCGGGTGGCTGAACGAACTCGAACGCAGTGGCATCGTGCACGACTGGAGCCTGGATATCCTCAGCCGGCTGTGGCGCAAGCTGGCCCTGAACTG CGCAATCAACCCATTGACCGTGCTGTACGACTGCCGCAATGGCGGCCTGAGCGAGCACCCAGCCGAAATCACCACGCTCTGCGCCGAACTGGGCGAACTG CTTGAAACCTGTGGTCAACCCGCCGCCGCCACGGATCTGCATGACGAGGTGCTGCGCGTAATCCAGGCCACCGCGGCGAACTACTCCTCGATGCTTCAGG ATGTGCGGCAAGGCCGCCGCACCGAGATCGCCTACCTGCTCGGTCATGCCTGCGCCGCGGCCCAACGGCATAACCTGGCCGTACCACATCTGCGTGCGCT GCATACGCGCCTGGTCCAGCACCTGAACGCGCATGGATTGCCCAGCCAATAAGCCGCGCGTTACCCTGCTCGCACTTTCGCCATAGCGACGTACCCGCCC
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| DNA Sequence for Gene |
>TMS3_RS0119140
ATGCTTCTGCGTCAGCGCCTCGAAAACCTGCCCGTCGGTCGCAAGCTGCTGGCCGCTCTACTGGTCCTGCTGATGGCGGTACTGCTGGTCGCCAACCTGG CGTTCATCAGCGCGGCCTACTGGATTTCCCAAGAGAGCATGGCGCCACAAGCCTTGCACACCCTCGGCCGACTGATCGCCAGCCCGCCCCTGAGCCAAGA GGCGCTGAGCTCGGCGAGCGCTGCCGAAGGCCTGCTCAAACGTCTGGATGATTACGCACCGCTGCGCGCGGCGGTGATCTACGACAGCGACGGCGCCAGC CTGGCGCAGCTGCAGCGCGGCGAGGAGCTGCTCCTACCGCTGCGCGTCGAGCAACTGGACTCCTGGCGCTACAGCGAATTCCGCACCAACCTGCTGGTCG AACTGCCGCAGCACGGCAATCGCCCCGGGCACTTGCTGTTGGTCGCCTCGGGCGAGCTGCCTGGCGCCTTTTACACCGGCACCCTGACTGCCAGCGGAGC GATCCTGTTCGTCAGCATCCTGCTGTGGTTTGCCGTGGCGCGACAAATCCGCCGCCTGGTGACCAAGCCGATCCGCAGGCTGGAAGAATTGTCGCGTCAG GTCACCCGCGAGGAGAACTATGCCTTGCGCGCCGGTCGCGGTAATCAGGACGAGATTGGCAGCCTGGCCGACGCATTCAACACCATGCTGATGCGCATCG AGGCGCGCGAGCAGCAACTCAAGCGCGCCCGCGACGACGCCCAGGAGGCATTCGACCAAGCGCATAACCTGGCCGAGGAGACCCGTCATTCCAACCGCAA GCTGGAACTGGAAGTCCAGGTGCGCAGCAAGATCGAGAAGAAGCTCACAGGGTTCCAGAACTACCTCAACAGCATCATCGACTCCATGCCCTCGGCGCTG ATTGCCCTCGACGAGCAACTCTACGTGACGCAATGGAACCAGGCCGCCAGCGCCCTCTCCGGCACCCGCCTGGACGAAGCGCTGAACCAGCCGGTATTTC TCGCCTTCCCACCACTGAAAGCCTTTCTCGCGCAACTCAAACACAGTGTCGAACAGCACAAGGTCGAGGAAGTCGAACGGGTGACCTGGAGCAAGGGCGA AGAGTCGCGCCACTATGCGCTGACCTTCTACCCCTTGATGGGCGGCACCGGGCGCGGCGTGGTGATCCGCATCGACGACATCACCCAGCGCCTGAGCCTG GAAGAAATGATGGTGCAGTCGGAGAAGATGCTCTCGGTCGGCGGCCTCGCCGCCGGCATGGCCCACGAGATCAACAACCCGCTCGGCGCCATCTTGCATA ACGTGCAGAACATTCGCCGTCGCCTGTCGCCGGAACTGGCGAAGAACCAGCAACACGCCGAGCAGATCGGCGTCAGCCTGGATGCCATCGACCATTACCT GCACGCCCGCGAAGTGCCCCGCCTGCTCGACGGAATCCAGCAGGCCGGCACTCGCGCGGCGAAGATCGTCAGCCACATGCTCAGTTTCAGTCGCCTGAGC AACCGGCAGCTGGCACCCTGCGAACTGCCTGCGCTGATCGATCAGGCGCTGGAAATCGCCAGTAATGACTTCGACCTGACGGAAAGTTTCGACTTCAAGA GCCTGGTCATCCAGCGCGAATTCGACCCTGCGCTCGGCCCCGTCCCGGGTATTGCCAACGAACTGGAGCAGGTACTGCTCAACCTGCTGAAAAACGCCGC CCAGGCGATTCACCAGCGCGACGACGAGAGCCTGCCTGGGCAGATAACCCTGCGCACCAAGCTGGCGCCCCCCTGGGTGGAGGTGCAGGTGGAAGACAAC GGGATCGGCATGCCCGAGTCGGTGCGCAAGCGCATCTTCGAGCCCTTCTTCACTACCAAGGAAGTCGGCCAGGGCACCGGGCTGGGTCTGTCGGTCTCCT ACTTCATCATCACCAACAACCACAAAGGGCAAATGGAAGTGCAGTCCAAACCGGGCCAGGGTACGTGCTTCACCCTGCGCCTGCCGCTGCCTGCCGCCCC CACACATTCAGGGCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATATGGGTTATCGACTGTCGAAGATTTACACACGCACCGGCGACAAGGGTGAAACCGGCTTGGCCGACGGTAGGCGGGTCAGCAAGGATCACCCGCGAGT AGAGGCCATGGGCGAAGTCGACACGCTGAACAGCCAGCTCGGCCTGCTCCTGGCCGAGCTGGCCGAACAGGCACTCCAGCAGCCCGCGCTGAACGAAATA AGCGAGGTGCTCGCGCCCTGTCAGCATCGTCTGTTCGACCTCGGCGGCGAGCTGGCGATGCCGGACTACCAGGCGCTGCACGAGGATGAAGTCGAACGTC TGGAGGCGGCGATCGACCGCTGGAACGAAGAGCTCGGCCCGCTGGAGAACTTCATCCTGCCCGGCGGCTCCCGCCTGATTGCCCAGGCCCACGTGTGCCG TAGCCTGGCCCGTGGGGCAGAACGGCGCTGCCAGCAACTGAATGCCGAGGAGCCTATCCGCGCCGTCGGGCTGGCCTACGTCAACCGGTTATCCGACCTG
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| Amino Acid Sequence |
>histidine kinase
MLLRQRLENLPVGRKLLAALLVLLMAVLLVANLAFISAAYWISQESMAPQALHTLGRLIASPPLSQEALSSASAAEGLLKRLDDYAPLRAAVIYDSDGAS LAQLQRGEELLLPLRVEQLDSWRYSEFRTNLLVELPQHGNRPGHLLLVASGELPGAFYTGTLTASGAILFVSILLWFAVARQIRRLVTKPIRRLEELSRQ VTREENYALRAGRGNQDEIGSLADAFNTMLMRIEAREQQLKRARDDAQEAFDQAHNLAEETRHSNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNQAASALSGTRLDEALNQPVFLAFPPLKAFLAQLKHSVEQHKVEEVERVTWSKGEESRHYALTFYPLMGGTGRGVVIRIDDITQRLSL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPELAKNQQHAEQIGVSLDAIDHYLHAREVPRLLDGIQQAGTRAAKIVSHMLSFSRLS NRQLAPCELPALIDQALEIASNDFDLTESFDFKSLVIQREFDPALGPVPGIANELEQVLLNLLKNAAQAIHQRDDESLPGQITLRTKLAPPWVEVQVEDN GIGMPESVRKRIFEPFFTTKEVGQGTGLGLSVSYFIITNNHKGQMEVQSKPGQGTCFTLRLPLPAAPTHSGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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