Strain | Pseudomonas taeanensis MS-3 contig_06, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTCAAGGCCGGGGTGCAGATTTTCGAATACCGGCCCCGTCTGCTGCATTTGAAAATGGTGCTGGTAGACGACTGGGTCAGCGTCGGTTCGTGCAACTTC GATCATTGGAACCTGCGCTTCAACCTGGACGCTAACCTGGAGGCGCTCGACCCGCAGCTGACCGCGGCGGTAGTGGCCAGCTTTCAGGAAGATTTCGCCG ACAGCGATGAAGTCAGCCTGCAACAGTGGCGCGCGCGTCCTTGGTGGCGACGCGCCCAGCAGCGGGTGTGGGGCTGGTTGGATCGTGTGGTGGTGAACCT GCTCGATCGCCGCCACTGAACCACTGCACAGCCTGCCGGCGTTGCGCGTGCGGCGGCGCCCGGCAATTCATTCGACCGAACTTGGCTTAAGCAACTGGCC GTAGCGGCCACGCATTTCCCTGACGTAGTTCTAGGCTATTACCTGTCTACCGAAAAGACGGCAGATACTCATCGCGTCCTTACCCTGCCAGGAGACCTCC
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DNA Sequence for Gene |
>TMS3_RS0118910
ATGACTGCGAAGAACATTTTGATGCTGGTCGGCGACTACGTCGAAGATTATGAAGTGATGGTGCCGTTCCAGGCCCTGCAGATGGTCGGCCATGTCGTGC ATGCGGTCTGTCCGGACAAAGTCGCCGGGCAAAGCGTGCGCACCGCCATCCATGACTTCGAGGGCGACCAGACCTACAGCGAAAAGCCTGGGCACAACTT CGTGCTGAACTACGACTTTGCCAAGGTCAGGGCCGATCATTACCAGGGCCTGCTGATTCCCGGCGGCCGTGCCCCGGAATACCTGCGCTTGAATGATCAG GTGCTGGAGCTGGTCAGAGCCTTCGCCAAGGCCGATAAACCGATTGCCGCAGTGTGCCACGGTGCCCAGTTGTTGGCGGCGGCCGGCGTGCTCGAGGGCC GCGAGTGCAGCGCTTACCCGGCCTGCGCACCGGAAGTGCGGCTGGCCGGTGGCGAGTATGTGGACATCGCTGTGGATCACGCGCATATCCAGGGCAATCT GGTCACCGCTCCGGCCTGGCCGGCGCATCCCATCTGGTTGGCCGGCTTCCTGACGCTGCTGGGCACAAAGATCAGCCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGTGGCGTGTTGACTGTGGCAGCGTTCGCAAGGCGGCCGATTAAGCGACAATCAAGCAGCTAATCGCGGCCAAGGCCGCTGCCACAGTGTCCAACTTGA GAGGCCATGGTTCATGTGCGAACTCTACGTCAAAGCCGATCCGATCCTTTACGAGTCACGCTCGCGCTCGCTGCGGATTCGCGGCGTGGTCACCACCCTG CGTCTGGAAAACCAGTTCTGGGACATCCTGCGCGAGATTGCCGAGACCGATGGCATGACCACCAATCAGTTGATCAGCAAATTGCATGAGGAAGTGATGG ATTACCGCGGCGAGGTGGTCAACTTTGCTTCCTTTCTGCGCGTCAGCTGCACGCGTTTTCTCAGCCAGCGGCGCGACAGGGTCAGTGAGTTGAGTCTGGT GCCGGGGCGTGCCATGCCCTGATCGTTTGATGATCTATACCGGCGTTGCCAACCCGGTCAGACTCCATAGATTTCGCGTAGCCACGCCAACCGTTAGTTT
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Amino Acid Sequence |
>glutamine amidotransferase
MTAKNILMLVGDYVEDYEVMVPFQALQMVGHVVHAVCPDKVAGQSVRTAIHDFEGDQTYSEKPGHNFVLNYDFAKVRADHYQGLLIPGGRAPEYLRLNDQ VLELVRAFAKADKPIAAVCHGAQLLAAAGVLEGRECSAYPACAPEVRLAGGEYVDIAVDHAHIQGNLVTAPAWPAHPIWLAGFLTLLGTKISL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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