Pseudomonas taeanensis MS-3, TMS3_RS0117960
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR38033 | MEMBRANE PROTEIN-RELATED | - | - | 23 | 281 | 2.4E-84 |
| NCBIfam | NF038228 | NCBIFAM: type IVB secretion system protein IcmH/DotU | - | - | 58 | 276 | 2.0E-52 |
| NCBIfam | TIGR03349 | JCVI: DotU/TssL family secretion system protein | IPR017732 | Type IV / VI secretion system, DotU | 62 | 271 | 2.8E-73 |
| Pfam | PF09850 | Type VI secretion system protein DotU | IPR017732 | Type IV / VI secretion system, DotU | 63 | 265 | 1.7E-68 |
| Gene3D | G3DSA:1.25.40.590 | Type IV / VI secretion system, DotU | IPR038522 | Type IV / VI secretion system, DotU superfamily | 60 | 218 | 2.0E-49 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.