Pseudomonas taeanensis MS-3, TMS3_RS0107915 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas taeanensis MS-3 contig_01, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGCCGAGGTGCTGGCCCTGAATCCCGACGGCGTGTTCCTGTCCAACGGCCCGGGCGACCCCGAGCCGTGCGACTACGCGATTCAGGCGATCCAGGACGT ACTGCAAACCGATGTTCCGGTATTTGGTATCTGTCTGGGTCACCAGCTGCTGGCCCTGGCGTCCGGCGCCAAGACCCTGAAAATGGGCCATGGCCATCAC GGTGCCAACCACCCGGTGCAGGATCTGGACAGCGGCGTGGTGATGATCACCAGCCAGAACCACGGTTTTGCCGTGGACGAGGCCAGCCTGCCAAACAACG TTCGCGCCATTCACAAGTCGCTGTTCGACGGTTCCTTGCAGGGCATTGAGCGTACCGACAAGGCCGCCTTCAGCTTCCAGGGTCACCCTGAAGCCAGCCC GGGCCCGGCTGACGTCGCACCGCTGTTCGACCGTTTTATCGAAACCATGGCCAAGCGCCGATAAGCCCGCCGACTGACCCAAGGATTCGAGAGTAAGAAA
DNA Sequence for Gene
>TMS3_RS0107915 |carB
ATGCCAAAACGTACAGACATAAAAAGCATCCTGATCCTCGGCGCTGGCCCGATCGTTATCGGCCAGGCCTGCGAGTTCGACTACTCCGGTGCCCAGGCGT GTAAGGCCCTTAAAGAAGAAGGCTTTCGCGTCATTCTGGTGAACTCCAACCCAGCCACCATCATGACCGACCCGGCCATGGCCGACGCCACTTACATCGA GCCGATCAAGTGGTCCACCGTGGCCAAGATCATCGAGAAGGAGCGTCCTGACGCCCTGCTGCCGACCATGGGCGGGCAGACCGCGTTGAACTGCGCGCTG GACCTGGAAAAGCACGGCGTGCTGGAAAAATTCGGCGTCGAGATGATTGGCGCCAACGCCGACACCATCGACAAGGCCGAAGATCGCTCGCGTTTCGACA AGGCGATGAAGGACATAGGTCTGGCCTGCCCGGTATCCGGCATCGCGCACAACATGGAAGAAGCCTACGGGGTTCTGGAAAAGGTCGGTTTCCCCTGCAT CATTCGGCCGTCCTTCACCATGGGCGGCACCGGTGGTGGCATCGCCTACAACCGCGAAGAGTTCGAAGAGATCTGCGCCCGCGGTATCGATCTGTCGCCG ACCAGCGAATTGCTGATCGACGAATCGCTGATCGGCTGGAAGGAATACGAGATGGAGGTGGTCCGCGACAAGAAGGACAACTGCATCATCGTCTGCGCCA TCGAAAACTTCGACCCGATGGGCGTGCACACCGGTGACTCGATCACCGTGGCGCCGGCGCAGACCCTGACCGACAAGGAATATCAAATCCTGCGTAACGC CTCGCTGGCGGTATTGCGCGAGATCGGCGTGGAAACCGGCGGTTCCAACGTGCAGTTCGGCATCTGCCCGAACACTGGGCGCATGGTAGTGATCGAGATG AACCCGCGGGTGTCGCGTTCCTCGGCGCTGGCCTCCAAGGCTACCGGCTTTCCGATCGCCAAGATCGCCGCCAAGTTGGCGGTCGGTTACACCCTCGACG AGCTGTCCAACGACATCACCGGCGGGCGTACCCCAGCCTCGTTCGAGCCGGCCATCGACTATGTCGTCACCAAGATTCCGCGTTTTGCCTTCGAAAAGTT CCCCAAGGCCGATGCCCGTCTGACCACCCAGATGAAGTCGGTCGGTGAGGTCATGGCCATCGGACGGACCTTCCAGGAATCCATGCAGAAAGCCCTGCGC GGTCTGGAAGTCGGCGTGTCCGGTTTCGACCCCATGCTCGATCTGAGCGATCCCGAGGCGGAAAGCACCCTCAAGCGCGAGCTGATCGTGCCGGGCGCCG ATCGCATTTGGTACATTGGTGACGCCTTCCGTGCCGGTAAGACGGTCGCCGAAGTGTTCGAGCTGACCCGTATCGACGAATGGTTCCTGGTGCAGATCGA AGACCTGATCAAGGATGAAGAGCGGATCAAGACCCTGGGCCTGGCCAGCATTGACCGTGATGCGATGTACAAGCTCAAGCGCAAGGGCTTCTCCGATATC CGTCTGGCCAAGCTGCTCGGCGTTTCCGAGAAGAGCCTGCGCAGCCACCGCCACAAACTCAAAGTGCTGCCGGTATACAAGCGCGTCGACACCTGCGCCG CCGAATTCGCCAGCGACACCGCCTATATGTATTCGACCTACGAGGAAGAGTGCGAGGCCAACCCGTCGACCCGCGACAAGATCATGATCTTGGGTGGCGG GCCTAACCGCATCGGTCAGGGTATCGAGTTCGACTATTGCTGCGTGCACGCGGCCCTGGCGCTGCGCGAAGACGGTTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTCTCCACCGACTACGACACCTCCGACCGCCTGTATTTCGAGCCGGTAACTCTGGAAGACGTGCTGGAAATCGTCCGTGTCGAGCAGC CGAAAGGTGTGATCGTGCAATACGGCGGGCAGACCCCGTTGAAGATCTGTCGCGCCCTGGAAGAAGCCGGCGTGCCGATTATCGGCACCAGCCCGGATGC CATCGACCGCGCCGAAGATCGCGAGCGCTTCCAGCAAATGGTCCAGCGCCTGCACCTGCGCCAGCCGCCGAACTGCACCGCGCGTAGCGAGGAAGAGGCG CTGGCCGCTTCCAAGGTCATCGGTTATCCGCTGGTGGTGCGTCCGTCCTATGTATTGGGCGGTCGGGCCATGGAAATCGTCTACCAGGAAGAAGAGCTGC GACGCTATATGCGCGAAGCGGTGAAGGTGTCGAATGACAGCCCGGTGCTGCTCGACCACTTCCTCAACTGCGCTATCGAAGTCGATATCGATGCCATCTG CGACGGCGAGACCGTGGTAATTGGCGCGATCATGCAGCACATCGAACAGGCCGGTGTGCACTCCGGCGACTCGGCGTGCTCGCTGCCGCCTTACTCGCTG CCAGCGCACATCCAGGACGAGATCCGCGACCAGGTCAAGAAAATGGCCCTGGAGCTCGGCGTGGTTGGTCTGATGAACGTGCAGATGGCGGTGCAGGGCG AGGATATCTTCGTTATCGAAGTCAATCCGCGCGCTTCGCGTACCGTGCCGTTCGTCTCCAAGTGCATCGGTATTTCCCTGGCAATGCTCGGTGCGCGCGT GATGGCGGGCAAGACCCTGGCGGAACTCGAGTTCACCCAGGAAATAATCCCCAACTTCTACAGCGTCAAGGAAGCGGTGTTCCCCTTCGCCAAGTTCCCT GGCGTCGACCCGATCCTCGGCCCAGAAATGAAGTCCACCGGCGAGGTGATGGGGGTTGGCGATACCTTTGGTGAAGCCTTTGCCAAGGCTCAGATGGGTG CCAGTGAAGTGTTGCCGAACTCCGGTTGCGCGTTTATCAGCGTACGCGATGATGACAAGCCCTTGGTGGCCGAAGTCGCCCGTGACCTGATAGAGCTGGG TTTCGAGGTGGTGGCCACCGCCGGTACCGCCAAGCTCATCGAGGCCGCCGGCTTGCCCGTGCGTCGGGTCAACAAGGTGACCGAGGGGCGTCCGCATGTG GTCGACATGATCAAGAACGACGAGGTCACTCTGATCATCAACACCACCGAGGGGCGTCAATCGATTGCCGACTCCTACTCCATTCGTCGTAACGCCCTGC AGCACAAGATCTACTGCACCACCACCATTGCGGCGGGTCAGGCGATCTGTGAGGCGCTCAAATTCGGTCCCGAGAAGACCGTGCGCCGCTTGCAGGATCT CCATGCAGGAATCAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTAAATACCCCATGACGGTCCAGGGCGCTCGCGCCCTGGAAGAAGAACTGGCCCATCTGACCAAGGTGGTGCGACCCAAGCTGAGCCAGGACATCGGTAC TGCGCGCGAGCTGGGTGATCTCAAGGAAAACGCCGAATACCACGCTGCGCGCGAACAGCAAGGTATGGTCGAGGCGCGCGTGCGCGATATCGAAGGTCGT CTGCAGAATGCGGTGGTCATTGATGTGACCAGCATTGCGCACACGGGCAAGGTGATCTTTGGCACGACAGTTGAGATCGCCAACGTCGATACTGACGAAA GCGTGACCTACCAGATCGTCGGTGAGGACGAGGCGGAGATTAAACTCGGTAAGATTTCAGTTGGCTCGCCTATTGCTCGCGCCCTCATCGGTAAGCAAGA GGGTGATGTGGTGACGGTAAAGACCCCGAGCGGTACGGTCGAGTACGAGATTGTCGAGGTCCGTCATATCTAATCCCGCGGCACTGGGTGCTGGGGGCAT
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMADATYIEPIKWSTVAKIIEKERPDALLPTMGGQTALNCAL DLEKHGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKDIGLACPVSGIAHNMEEAYGVLEKVGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGIDLSP TSELLIDESLIGWKEYEMEVVRDKKDNCIIVCAIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKIPRFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALR GLEVGVSGFDPMLDLSDPEAESTLKRELIVPGADRIWYIGDAFRAGKTVAEVFELTRIDEWFLVQIEDLIKDEERIKTLGLASIDRDAMYKLKRKGFSDI RLAKLLGVSEKSLRSHRHKLKVLPVYKRVDTCAAEFASDTAYMYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKICRALEEAGVPIIGTSPDAIDRAEDRERFQQMVQRLHLRQPPNCTARSEEEA LAASKVIGYPLVVRPSYVLGGRAMEIVYQEEELRRYMREAVKVSNDSPVLLDHFLNCAIEVDIDAICDGETVVIGAIMQHIEQAGVHSGDSACSLPPYSL PAHIQDEIRDQVKKMALELGVVGLMNVQMAVQGEDIFVIEVNPRASRTVPFVSKCIGISLAMLGARVMAGKTLAELEFTQEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPNSGCAFISVRDDDKPLVAEVARDLIELGFEVVATAGTAKLIEAAGLPVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGQAICEALKFGPEKTVRRLQDLHAGIKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site