Pseudomonas taeanensis MS-3, TMS3_RS0106790 (obgE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taeanensis MS-3 contig_01, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCAAAATCACCGGTATTCAGGCCTGATTCGTTTCGGCCTGATCCCTTTATAGGAGTATTGAACTCATGGCACACAAAAAAGCTGGCGGTAGTACCCGCA ACGGTCGCGACTCAGAAGCCAAACGCCTTGGCGTGAAGATGTATGGCGGCCAGGTTATCAAGGCAGGCAACATCATCGTGCGTCAGCGCGGTACCCAGTT CCACGCCGGTTACGGCGTTGGCATGGGTAAAGATCACACTCTCTTCGCTAAAATCGAAGGCGTGATCAAGTTTGAAGTAAAGGGCGCGTTCAACCGCCGT TACGTGAGCGTCGTCGCGGCTTAATCGCGAGGCTGCTGGAGAAGCCCCGTCCTTGCGACGGGGCTTTTTTGTTTCTGTATTCTTGGGGTTCTTGCCAAAC TGTCCTGGGTGTAGCGTTCTGTTAGGGCGCAGGTCAATTTTGCAAGAACCTGGTGTTTTACGTTTTAGATAACCCGTACTCGTTGCGGGAGGCGTACTCA
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| DNA Sequence for Gene |
>TMS3_RS0106790
|obgE
ATGAAATTCGTCGATGAAGTATCGATATTTGTAAAAGCGGGCGATGGCGGCAACGGCATGATGAGCTTCCGACGTGAGAAGTTCATCGAGAAGGGTGGGC CCAACGGTGGTGATGGGGGTGATGGTGGCTCGGTGTATATCGAGGCGGCCGAGAACTTCAATACTCTGGTGGACTATCGCTATACCCGCCGTTTTCAGGC TCAGAATGGCGAGAAGGGCGGCAGCACTGATTGCACCGGGAGTAAGGGTGAGGATTTGATCCTGCCGGTGCCGATTGGTACGACGGTGATCGATTCGGCA ACCCAGGAGGTGATCGGCGATCTGACCAAGGCTGGTCAGCGTTTGCTGGTCGCGCAGGGTGGCTGGCATGGCCTGGGTAATACCCGCTTCAAGTCCAGTA CCAATCGTGCGCCGCGGCAGACCACGCCAGGCAAGCCGGGCGACTCGCGTGACCTCAAGTTGGAGCTGAAGGTGTTGGCGGATGTCGGTCTGCTGGGCTT GCCCAATGCCGGCAAGAGCACCTTTATCCGCTCGGTCTCGGCTGCCAAGCCGAAAGTCGCCGACTATCCGTTTACCACGCTGATCCCGAATCTGGGTGTG GTGAGTGTCGAGCGCTACAAGAGTTTTGTGGTGGCCGATATTCCAGGTCTGATCGAGGGTGCTTCGGAAGGTGCGGGGCTGGGTATCCGCTTCCTCAAGC ACTTGTCGCGAACTCGCTTGCTCCTGCATCTGGTGGATATGGCGCCGCTGGATCTGACTGACCCGATAGAGGCGGCGGCGGTGATCGTTGATGAGCTGAC CAAGTTCAGTCCGGCGTTGGCTGAGCGTGATCGTTGGTTGGTGCTGAACAAGGCCGATCAGCTGCTCGAAGAAGAGCACGAGGCGCGGGTCGCAGAGATC GTCGCGCGGCTCGAGTGGAAGGGGCCGGTGTATGTTATCTCCGCCCTGGCTCGCGAGGGTACCGAGCGCTTGTGTCATGACATCATGCGTTATCTCGAAG AGCGTGCCATGAAGGTGGCCGAGAATCCGCAATTTGCCGCGGAGTTGGCTGAGTTGGATCAGCGTATCGAAGATGAGGCGCGTGCTCGCTTGCAGGAGCT GGACGATCAGCGTGCGTTGCGTCGGGCAGGGGTCAAGAGTGTTGATGATGTCGACGAAGATGACTTCGATGACGAAGATGACGATGACGGCCCGGAAATC ATTTATGTCCGGGATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTAGAATTTCAACGCCGCTTAATAGCGGCGTTGTTGTAATGGGTGCACAAGCGCTTTCTGGCTAAGGTTGGAAGATCATGCGTGACAAGGTAACCGGTGC GCGGCGCTGGGTAGTGAAGATTGGCAGTGCGTTGCTGACGGCTGATGGGCGAGGGCTGGATCGCGCGGCAATGGCGGTTTGGGTCAAGCAGATGGTGGCG CTGCGCGAGCAGGGGGTCGAGCTGGTGCTGGTGTCCTCTGGGGCGGTGGCGGCCGGGATGAGTCGGCTGGGCTGGGTGGCTCGGCCCAGTGCGATGCACG AGCTGCAGGCCGCGGCGGCCATTGGCCAGATGGTTCTGGTGCAGGCGTGGGAGTCGAGCTTTGCCGAGCATGGTCGGCACACGGCGCAGGTCCTGCTGAC CCATGATGATCTGTCGGACCGCAAGCGCTACCTGAATGCGCGTAGCACGTTGCGCACCCTGGTCGAGCTGGATGTGATTCCGGTGATCAACGAGAACGAC
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| Amino Acid Sequence |
>GTPase CgtA
MKFVDEVSIFVKAGDGGNGMMSFRREKFIEKGGPNGGDGGDGGSVYIEAAENFNTLVDYRYTRRFQAQNGEKGGSTDCTGSKGEDLILPVPIGTTVIDSA TQEVIGDLTKAGQRLLVAQGGWHGLGNTRFKSSTNRAPRQTTPGKPGDSRDLKLELKVLADVGLLGLPNAGKSTFIRSVSAAKPKVADYPFTTLIPNLGV VSVERYKSFVVADIPGLIEGASEGAGLGIRFLKHLSRTRLLLHLVDMAPLDLTDPIEAAAVIVDELTKFSPALAERDRWLVLNKADQLLEEEHEARVAEI VARLEWKGPVYVISALAREGTERLCHDIMRYLEERAMKVAENPQFAAELAELDQRIEDEARARLQELDDQRALRRAGVKSVDDVDEDDFDDEDDDDGPEI IYVRD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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