Pseudomonas taeanensis MS-3, TMS3_RS0106245

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.50.2300:FF:000346 Diguanylate cyclase response regulator - - 246 374 1.4E-56
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 370 536 3.2E-49
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 199 537 7.8E-90
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 378 532 7.3E-42
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 243 374 1.25E-31
SMART SM00267 duf1_3 IPR000160 GGDEF domain 366 536 9.2E-52
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 249 362 7.0E-30
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 123 237 0.077
CDD cd00156 REC - - 252 352 1.04046E-25
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 134 243 8.3E-8
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 251 362 2.1E-23
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 375 535 7.0E-47
Gene3D G3DSA:3.40.50.2300 - - - 246 374 2.8E-29
CDD cd01949 GGDEF IPR000160 GGDEF domain 378 534 2.88761E-57
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 375 537 2.0E-51
Gene3D G3DSA:3.40.50.2300 - - - 131 245 6.0E-7
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 381 536 3.22E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.