Pseudomonas taeanensis MS-3, TMS3_RS0102820
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taeanensis MS-3 contig_01, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCAAAGTTGATCTACCTCACGATGCTGCCTTTTTCATTGCCCAGCGCATACGTTCCAACGTGCGTGAACTGGAGGGTGCGTTGAAGCGAGTCATCGCG CACTCGCACTTCATGGGCCGCGACATCACCATCGAGTTGATCCGCGAGTCCTTGAAGGATCTGTTGGCGCTGCAGGACAAGCTGGTCAGCATCGACAATA TCCAGAGAACGGTTGCCGAGTACTACAAGATCAAGATGTCAGACCTGCTCTCCAAGCGTCGTTCGCGCTCAGTGGCACGACCCCGGCAGGTCGCGATGGC GCTGTCGAAGGAGCTGACCAACCATAGCCTGCCGGAAATCGGCGACGTCTTTGGCGGCCGTGATCACACTACGGTATTGCATGCTTGCCGTAAGATTGCT GAACTTAGGGAATCCGACGCGGATATCCGCGAGGACTACAAGAATCTGCTGCGTACACTGACTACCTAATACGCAACTCCACTAGGCAAGGGACTAGACC
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| DNA Sequence for Gene |
>TMS3_RS0102820
ATGCATTTCACTATTCAACGCGAAGCCCTGTTGAAACCTCTGCAACTGGTCGCCGGCGTCGTGGAACGCCGCCAGACCTTGCCGGTGCTCTCCAACGTGT TGCTGGTGGTTGAAGGCCAGCAACTGTCGTTGACCGGTACCGACCTCGAAGTCGAACTGGTTGGTCGGGTCAGCTTGGAAGAGCCGGCCGAGCCAGGCGA AATCACCGTTCCTGCGCGCAAGCTGATGGATATCTGCAAAAGTCTGCCGAACGATGCCCTGATCGATATCCGTCTCGATGAGCAGAAACTGTTGGTGAAA GCCGGTCGCAGTCGCTTCAGCCTGTCGACTCTACCCGCCAATGACTTCCCGACCGTCGAGGAAGGTCCTGGCTCACTAACTTTCGATCTGGGCCAAAGCA AGTTGCGCCGATTGATTGAGCGCACCAGTTTCGCCATGGCTCAACAAGACGTGCGTTACTACCTCAACGGCATGTTGCTCGAGGTACAAAGCGGTGTGCT GCGTGCTGTGGCAACTGACGGTCATCGCCTGGCCATGTGTTCGATGGAAGCGGCTATCGAACAAGTCGATCGCCACCAGGTCATCGTGCCGCGTAAGGGT ATTCTGGAACTGGCGCGTCTACTGACAGAGCAGGACGGCAGCGTGAGTATCGTCCTCGGTCAGCATCACATTCGTGCAACCACGGGTGAGTTCACTTTCA CCTCCAAGCTGGTTGACGGCAAGTTCCCCGACTACGAACGTGTACTTCCTCGTGGCGGTGATAAATTGGTGGTGGCTGACCGTCAAGGCTTGCGCGAGGC GTTCAGCCGCACCGCGATTCTGTCCAATGAAAAGTATCGCGGTATCCGCTTGCAACTGGCTTCTGGCCTACTGAAGATTCAGGCGAATAACCCAGAGCAG GAAGAAGCCGAAGAAGAGATCGCCGTCGATTATAACGGTAGTGAATTGGAGATCGGCTTCAACGTCAGTTATCTGTTGGATGTACTGGGCGTAATGACCA CCGAGCAGGTCCGTCTTATCCTCTCCGACTCCAACAGCAGCGCCCTGGTACAGGAGGCAGACAACGACGACTCAGCGTACGTCGTGATGCCTATGCGTTT GTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACTTCAATGTCCCTGACCCGCGTTACAGTCACCGCGGTGCGTAATCTGCACCCGGTGACACTCTCCCCCTCCCCACGTATCAATATCCTCCATGGCGAC AACGGCAGCGGCAAAACCAGCGTGCTGGAAGCTATTCATCTGCTTGGCCTTGCCCGCTCATTTCGCAGTGCCAGACTGCTTCCAGTCATTCAGTACGAGC AAGTAGCCTGCACGGTTTTTGGTCAGGTGCTGTTGGCCGATGGCAGACTGAGCAGTTTGGGTATCTCTCGTGAGCGTCAGGGCGACTTTCAGATCCGTAT CGACGGGCAGAACGCGCGCAGTGCTGCACAGCTAGCCGAAACTCTGCCGTTGCAATTGATTAACCCTGATAGTTTTCGCCTCTTGGAAGGCGCGCCGAAG ATTCGCCGACAATTTTTGGATTGGGGAGTGTTCCACGTGGAACCTCGATTTCTGCCTGCGTGGCAGCGCCTGCAGAAGGCCTTGCGGCAGCGGAACTCGT
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| Amino Acid Sequence |
>DNA polymerase III subunit beta
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVSLEEPAEPGEITVPARKLMDICKSLPNDALIDIRLDEQKLLVK AGRSRFSLSTLPANDFPTVEEGPGSLTFDLGQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVQSGVLRAVATDGHRLAMCSMEAAIEQVDRHQVIVPRKG ILELARLLTEQDGSVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPRGGDKLVVADRQGLREAFSRTAILSNEKYRGIRLQLASGLLKIQANNPEQ EEAEEEIAVDYNGSELEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQEADNDDSAYVVMPMRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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