Pseudomonas taeanensis MS-3, TMS3_RS0102790
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taeanensis MS-3 contig_01, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAATCACCTATGGCCTGGAGCGCCTGGCCATGTACATCCAGGGCGTCGACTCGGTCTACGACCTGATCTGGACCGACGGTCCCTTCGGCAAGGTCACCT ACGGCGACGTGTTCCACCAGAACGAAGTGGAGCAATCGACCTACAACTTCGAACACGCCAACGTCGACAAACTGTTCGAATTGTTCGATTTCTACGAGTC CGAAGCCAATCGTCTGATCGAACTGGAACTGCCGCTACCGACCTACGAAATGGTGCTCAAGGCCTCGCACACTTTCAACCTGCTGGATGCCCGCCGCGCC ATTTCGGTGACCGAACGTCAGCGTTATATCCTCCGCGTGCGCACCCTGGCGCGCGCCGTGGCGCAGAGCTATCTGCAGGCGCGGCGCAAACTCGGCTTCC CGATGGCCACCCCCGAACTGCGTGACGAAGTACTGGCCAAACTGACAGAAACGGATCTGCTTCAAGGCAAAGCCCTGGGCAATAAGCTGGAGGCAGCAGA
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| DNA Sequence for Gene |
>TMS3_RS0102790
ATGAGTGCACTGGATTTTCTGGTTGAACTGGGCACCGAAGAGCTGCCGCCGAAAGCCCTGAAGACCCTCGGTGCAGCTTTCCTTGCAGGCATCGAAAAGG GCCTGAAAGCGGCCGGCCTGAGCTACGCCAACGCCCGCTATTACGCCGCGCCACGCCGCCTGGCCGTACTCGTCGAGCAGCTTGAAACGCAACAGGCGGA TCGCGCGCTGAACCTCGATGGCCCGCCCATGCAGGCGGCGTTCGACGCCAATGGCAATCCAACCCAGGCAGCCCTGGGCTTTGCCAAGAAGTGCGGGGTC GAGCTGAGCGAAATCGATCGCAGCGGGCCCAAGCTGAAATTCAGCCAGAACATTCCCGGCCAGGCCGCCGCCAGCCTGCTGCCCGCTATCGTCGACACCT CGCTGAATGAACTGCCGATTCCCAAGCGCATGCGCTGGGGCGCGCGCAAGACCGAGTTCGTCCGCCCGACCCAGTGGCTGGTGATGCTGTTCGGCGACCA GGTGATCGACTGCGAAATCCTTGCCCAGCAGGCTGGCCGGGTCTCCCGTGGCCACCGCTTCCACCATAACGTCGAGGTACGCATCTCCGCGCCGGCCAAT TACGCGCAAGAACTGCGCGCAGCCTATGTGATTGCCGACGCCGATGAGCGCCGCGAACTGATCGCCCAACGCGTGGCACAGTTGGCCGCCGAGCAGCAGG GCACGGCCATAGTGCCGCCGGCGCTGCTCGAGGAAGTCAGTGCTTTGGTCGAATGGCCGGTGCCGCTGGTCTGCTCCTTCGAGGAGCGCTTCCTCGAGGT GCCGCAGGAAGCACTGATCACCACCATGCAGGACAATCAGAAGTACTTCTGCCTGCTGGATAGCAACGGCAAGTTGCTGCCGCGCTTCATCACCGTGGCC AACGTCGAGAGCAAGGATCCGGCGCAGATCATCTCCGGCAACGAGAAAGTGGTACGACCCCGCTTGACCGATGCCGAGTTCTTCTTCAAGCAGGACAAGA AGCACAAGTTGGAGCTGTTCAACCAGCGCCTGGCTAATGTCGTCTTCCAGTCCCAGCTCGGCTCGGTCTATGAAAAAGCCCAGCGGGTTTCTGCCCTCGC GGCCTTTATCGCCGAGCGCGTCGGTGGCGATAAGGATCGCGCGGCGCGTGCCGGGATACTCTCCAAGTGCGACCTGGCCAGCGAGATGGTCGGCGAGTTC CCGGAAATGCAGGGCATCGCCGGTTACTACTATGCCAAGCATGATGGCGAAGCTGACGATGTCGCCCTGGCACTCAACGAGCAGTACATGCCACGCGGGG CAGGGGCCGAACTGCCCAGCACCCTGACCGGCGCGGCCGTGGCCCTGGCCGACAAACTCGACACCCTGGTCGGTATCTTCGGTATCGGCATGCTGCCCAC CGGCAGCAAAGACCCCTATGCCCTGCGCCGTGCGGCCCTCGGTGTGTTGCGGATCCTGATCGACAAGCAGCTGGATCTCGATGTGGTTGAAACCATTCAG TACGCCATTGGCCTCTACGGCCCGGGGCTTGAACAAGAGTGGAATACCATCGTCGCCAGCAAGCTGCAAAAGCAAGTCGGCGCCAACCCCACTGCCAGCG GCTTGGCCGAACAGGTGCAGGACTTCATCTTCGATCGCCTGCGTGCGCGCTACGAGGACGAAGGGGTCGATGTGTCCGTCTATCAGGCCGTACGCGCCCT GAGCCCGGCCGCGCCGCTGGACTTCGACCAGCGCGTGCAAGCGGTCCAGGCTTTCCGCGCGCGCAGCGAAGCCGACGCCCTGGCTGCGGCGAACAAGCGC GTGTCGAACCTGCTGAGCAAGTTCGACGGCGACGTACCGAGCCACGTCGACAGTACGCTGTTGCACGAGCCGGCCGAGCAGATGCTGGCCCAGGCCGTCG CCGACGCCGAACTGGCGGTCATGCCGATGGCTGCCGCCCGCTGCTACCGCGAGGCACTGGAGCACCTGGCCAGCCTGCGTGAACCGGTCGACGCCTTCTT CGAGGCGGTACTGGTGAACGCTGAAGATACCGCCGTGCGCGCCAACCGCTACGCACTACTGGCCAAGCTGCGCGGCTTGTTCCTCGGTGTTGCCGATATT TCGGTACTGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGATGAAGCTGCTGATCCTCGACCGCGACGGTGTGATCAATTACGACTCCGACGCCTATATCAAGTCGTTGGAGGAGTGGATTCCTCTGCCCGGCGCGG TCGAAGCCATTGCCCGCTTATCCAAGGCGGGCTGGACCGTGGCAGTGGCGACCAACCAGTCTGGCTTGGCGCGTGGCTATTACGACCCAGCAACGCTGGA CGCCATGCACAATCGCTTGCGCCAGTTGGTCGCGGAGCAGGGCGGGCAACTCGGCTTGATCGTGCACTGTCCACATGGCCCGGAGGACGGCTGTAACTGT CGCAAACCCAAGCCCGGCTTGCTCCAGCAGATCGCCACACATTACCGGGTTGCCCTGACTGGCTTGTGGTTCGTCGGCGATAGCACTGGTGACCTGCAGG CTGCGCAAGCCGTCGATTGTCAGCCGGTGCTGGTCAAGACCGGTAAAGGCGAACGCACCCTGGACAAGCCATTACCATCGGGCACCCTGGTATTCGATGA
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| Amino Acid Sequence |
>glycine-tRNA synthetase subunit beta
MSALDFLVELGTEELPPKALKTLGAAFLAGIEKGLKAAGLSYANARYYAAPRRLAVLVEQLETQQADRALNLDGPPMQAAFDANGNPTQAALGFAKKCGV ELSEIDRSGPKLKFSQNIPGQAAASLLPAIVDTSLNELPIPKRMRWGARKTEFVRPTQWLVMLFGDQVIDCEILAQQAGRVSRGHRFHHNVEVRISAPAN YAQELRAAYVIADADERRELIAQRVAQLAAEQQGTAIVPPALLEEVSALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDSNGKLLPRFITVA NVESKDPAQIISGNEKVVRPRLTDAEFFFKQDKKHKLELFNQRLANVVFQSQLGSVYEKAQRVSALAAFIAERVGGDKDRAARAGILSKCDLASEMVGEF PEMQGIAGYYYAKHDGEADDVALALNEQYMPRGAGAELPSTLTGAAVALADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKQLDLDVVETIQ YAIGLYGPGLEQEWNTIVASKLQKQVGANPTASGLAEQVQDFIFDRLRARYEDEGVDVSVYQAVRALSPAAPLDFDQRVQAVQAFRARSEADALAAANKR VSNLLSKFDGDVPSHVDSTLLHEPAEQMLAQAVADAELAVMPMAAARCYREALEHLASLREPVDAFFEAVLVNAEDTAVRANRYALLAKLRGLFLGVADI SVLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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