Pseudomonas taeanensis MS-3, TMS3_RS0101310

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01420
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00437 Type II/IV secretion system protein IPR001482 Type II/IV secretion system domain 110 270 1.4E-36
CDD cd01131 PilT IPR006321 Pilus retraction protein PilT/PilU 103 325 8.63455E-128
FunFam G3DSA:3.30.450.90:FF:000004 Type IV pili twitching motility protein PilT - - 1 99 2.2E-64
NCBIfam TIGR01420 JCVI: PilT/PilU family type 4a pilus ATPase IPR006321 Pilus retraction protein PilT/PilU 3 344 0.0
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 122 247 0.0012
Gene3D G3DSA:3.30.450.90 - - - 1 99 3.8E-29
PANTHER PTHR30486 TWITCHING MOTILITY PROTEIN PILT - - 3 343 3.2E-74
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 4 336 2.66E-70
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 101 358 1.8E-80
FunFam G3DSA:3.40.50.300:FF:001116 Type IV pili twitching motility protein PilT - - 101 358 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.