Pseudomonas pelagia CL-AP6, K787_RS0114080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas pelagia CL-AP6 111.KCCM90073.1_16, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTACGCCTGCCGCTGGGCACTGCGCTGGCGGTCGGGCTAATCTTCTGGGCCGTCAGCAGCTACATGCTCCAAGCGCTGCAGCAAGGCACACAGCTGCCGG ACATGACCCTGCTGGACGTTGAAGGCGAACAGGTCTCGTTGCAGGAGCTGAACGACCGGCCGCTGGTAGTCAATCTATGGGCCACCTGGTGCCCACCCTG CCGCCGGGAAATGCCGGTATTAGCCGATGCCCAGCAACGGGAAGCCGATATCGTCTTTGTCTTCGTCAACCAGGGCGAAGGCCCCGGAGAAATTATCCGT TTTCTGGATGCCACCGGTCTGACACTGCATAACGTTCTACTCGACACTGGTGGCCAGTTCGGCCAACAGGTCGGCTCGCAGGCGCTGCCCACCACTCTGT TCTACAACGCACAAGGCCAACAGGTCGCCAGCCACCTGGGCGAGCTGTCCGCGGCGAGCCTATCTCACCAGATTGCCAAACTCAAAGAGGAAGAAACGCC
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| DNA Sequence for Gene |
>K787_RS0114080
ATGATCCGATTACACGCAAAGCACGCACTCCCCGTGCTGCTATTGACCCTGTCGCCCTTCGCCAGCGCCGAAGACTGGCCCGCACCGATTGCCGCCACTA CCGAGCGCGGTGTCGAAATTGTTGGCCGTTTCGACGCACCCGCCGGCCTCCAGGGTTTTGCCGGCAAACTCAACGGTCAGGGCCTGGCCCTTTATCTCAC CGCAGATGAGCAACACGTTCTGGTCGGCACCCTGCTCGATGCCAACGGCAAAGACCTTAGCAGGGCGCATCTTGACGAACTGGTATATCAACCCATGGCC AAGGGCATGTGGACGCAACTGGAAGCCAGCGACTGGATCGGCGACGGTGCGGACAACGCCGCACGTGTGGTCTATACCTTCACCGACCCCAATTGCCCGT TCTGCAGCATGTTCTGGGAGCAAGCACGGCCCTGGGTAGAGTCAGGCAAGGTGCAGCTGCGGCACATTATGGTCGGCATACTGCGCGAAGACAGCGCCGG CAAATCCGCCGCCATCCTCGCCGCAGACGATCCCACCGCCGCCTTGCACCAACATGAAACCGGCGATAGCGTTCAAGCGGTAAACGAGATCCCTGCGGCC ATCAATCTACAGCTAAAAGCCAATCACGAACTGATGACCCAGCTCGGCGCCCAGGCCACACCGGCCATCTTCTATCTGGATGACCAGGGTCGCATGCAAC AACAACAGGGCGCGCCGCGGCCGGACCGCCTGGCAGACATCATGGGGCCAGAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCACGCAGGGCTAAAGCCGGCTCGGCTTACTGCTGGTTCACCGCAAGCGGATCGACCGAAGCACCCGCACCCAGCTCGGCACGCACCTTAGCCAAGCGG GCGCCTTCCTTCGCGGTGACGCTGAACAGTTTTGCCGGATCGGCGACACGCAGTTGCAGCGCGCCCAGCTCCATGCCCTCGGCCACCACGATGTCATGCT GGCGGGCGCTCAGGCCGTCCAGAATAGTCTGCGCTGCGGCCACCGGGTCGATGCCATTGTCGATATTAGTGTCCGAGCGTCCCCGCGCCGTGCCGCTGCC TTCCAGCGCGTTCAGCGCAATGGCGGTACGCACCGAGCCCGGCAGAATAACGCTCACGCCAATTCCGTAGGCTTCTTCTACCTCCGCACGCAACGCCTCG AAATAACCCACCACCGCATGCTTGGCGCCGCAGTATCCGGTGCGCAGCGCGGTACCCACCTTGCCCGCGACCGAACTCACCACCGCCAATTGCCCACCGC
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| Amino Acid Sequence |
>dihydroneopterin aldolase
MIRLHAKHALPVLLLTLSPFASAEDWPAPIAATTERGVEIVGRFDAPAGLQGFAGKLNGQGLALYLTADEQHVLVGTLLDANGKDLSRAHLDELVYQPMA KGMWTQLEASDWIGDGADNAARVVYTFTDPNCPFCSMFWEQARPWVESGKVQLRHIMVGILREDSAGKSAAILAADDPTAALHQHETGDSVQAVNEIPAA INLQLKANHELMTQLGAQATPAIFYLDDQGRMQQQQGAPRPDRLADIMGPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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