Strain | Pseudomonas pelagia CL-AP6 111.KCCM90073.1_16, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTTCCTCGCACACCATCTCGACCCGTCCCTGACTGCATCGTGCCGTATTGGCCCCGCCCCGCCTGACCCCCTCCAGCTTGATCTCCGCCATCCGGCTTTC TGCTGCCAACAGCGCGATGGACTTGTCGCGCAGCACCCCGTTGCTGGTGGTCATCAGACTGACCGCGCGTACCGCTGCGGCCATCGCGACGGCCACGATG GCAAGTGCAACCAGTACTTCGATCAGGGTGAAGCCTGACTGCCGAGTTCGTGCATTCATGAGTATTATCACCGGCCACATGGAGGGAAAAGCCTGTCTTC CAAGGGTATCCAGCGACTCTGACTATACGCTGACAAATCCTCCATAGGATGCTCATCACTCGATTGGTTTTTGCGTCTTTTTAGTGCTTTTGGCGCCCAT TTTCAGCCTTGTTTGCTTACATCCTATAGAGGATTTTCCACATCGGTGACATATCTTCTTGCCACAATCCCCTCAGACCCAACAGCCAAGGAGAGTAGAG
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DNA Sequence for Gene |
>K787_RS0113530
ATGGTGCGTACAGCACAACGGGGTTTCACCCTTATCGAAATCATGGTGGTAGTCGTTATCCTCGGCATTCTTGCTGCTGTGGTTGCCCCCAAGGTACTGG ATCGCCCGGATCAGGCGCGGGCCACAGCTGCCCGGCAGGATATAGGCGGGTTGATGCAGGCACTGGGGCTGTACCGTCTTGATCATGGCCAGTACCCGAG CATGAGTCAGGGCCTCAACGCGCTGGTTGAGCGACCGGCCGATGTTTCGGCGGACAACTGGCGTTCCTATGTCGAACGCGTACCGGAAGACCCCTGGGGC AGGAAGTATCAATACCTCAACCCCGGTGTTAACGGCGAAATTGATGTGTTTACCTTGGGTGCCGATGGCGTGCCCAATGGTGAAGGTGTCAATGCCGATA TTGGTTCCTGGCAGCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGACCATGAACACGCCGATAAGCCGATCATGTCAGTCCGGTATGGCCGTCATCAGTGCCTTGCTGATCGTCACCGTAGTCGCCGTGATTGCCGCGCAGA TTATCGCCAGCCAGACACAGTTCACACGAACGGTGCAGGCTGACCAGAACCGAGTACAGGGTACCTGGTTGTTGCGCGGCGCCCTGGAACAGGCGGAGCA GTTACTGTGGCACAGCCGACTGCAAGATCCTCTGACACGGCTGGATCAACAGTGGGCGCATGGCATCCTGGTTACTGGAGCTAGTGAAAGCCAACCCGCC ATCGAACTCAGGATCGAAGACGAACAGGGCAAATTCAACCTGCGTAACCTGGTGCGTGACGGTCAGGTGGATATGACCGAGTACGCCAGTTTCGAGCGGC TGTGTCTGTCGCTCGGGCTGAACCTCTCCATCGCCCAGCGCATCAGCCAGCGGGTCATCGAAAGCTACCCCCGGCGAACGGAACCGGTTGCCGAGGAGCC
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Amino Acid Sequence |
>general secretion pathway protein G
MVRTAQRGFTLIEIMVVVVILGILAAVVAPKVLDRPDQARATAARQDIGGLMQALGLYRLDHGQYPSMSQGLNALVERPADVSADNWRSYVERVPEDPWG RKYQYLNPGVNGEIDVFTLGADGVPNGEGVNADIGSWQL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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