Pseudomonas pelagia CL-AP6, K787_RS0112125

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004818 glutamate-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00022
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006424 glutamyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00022
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008270 zinc ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00808
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000049 tRNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48163
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00022
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00022
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0043039 tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52374 Nucleotidylyl transferase - - 8 312 8.04E-113
NCBIfam TIGR00464 JCVI: glutamate--tRNA ligase IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial 7 472 0.0
Gene3D G3DSA:3.40.50.620 HUPs IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 2 333 0.0
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 197 207 6.4E-23
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 25 36 6.4E-23
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 11 23 6.4E-23
Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain 8 324 2.5E-112
Pfam PF19269 Anticodon binding domain IPR045462 Aminoacyl-tRNA synthetase, class I, anticodon-binding 338 475 2.6E-30
Hamap MF_00022 Glutamate--tRNA ligase [gltX]. IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial 7 475 30.05578
CDD cd00808 GluRS_core IPR033910 Glutamyl-tRNA synthetase 7 332 0.0
Gene3D G3DSA:1.10.10.350 - IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 375 494 2.7E-29
PANTHER PTHR43311 GLUTAMATE--TRNA LIGASE - - 6 477 0.0
FunFam G3DSA:1.10.10.350:FF:000007 Glutamate--tRNA ligase - - 375 479 8.2E-35
SUPERFAMILY SSF48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding superfamily 318 476 8.5E-35
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 40 53 6.4E-23
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 213 221 6.4E-23
FunFam G3DSA:3.40.50.620:FF:000045 Glutamate--tRNA ligase, mitochondrial - - 1 333 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.