Pseudomonas pelagia CL-AP6, K787_RS0112060

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00382	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00004	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:3.40.50.300:FF:000025	ATP-dependent Clp protease subunit	-	-	549	765	1.7E-81
Coils	Coil	Coil	-	-	442	469	-
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	156	347	1.0E-68
CDD	cd19499	RecA-like_ClpB_Hsp104-like	-	-	557	765	4.12599E-84
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	596	757	2.5E-9
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	347	446	3.6E-28
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	600	618	8.1E-33
Gene3D	G3DSA:1.10.8.60	-	-	-	768	860	6.4E-7
Gene3D	G3DSA:1.10.1780.10	-	IPR036628	Clp, N-terminal domain superfamily	5	153	2.8E-21
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	208	338	3.5E-9
Coils	Coil	Coil	-	-	502	522	-
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	549	765	6.4E-67
SMART	SM01086	ClpB_D2_small_2	IPR019489	Clp ATPase, C-terminal	767	858	0.0014
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	770	836	1.4E-7
CDD	cd00009	AAA	-	-	188	339	7.06994E-15
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	645	663	8.1E-33
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	674	692	8.1E-33
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	545	833	4.33E-56
FunFam	G3DSA:3.40.50.300:FF:000010	Chaperone clpB 1, putative	-	-	155	347	6.8E-83
PANTHER	PTHR11638	ATP-DEPENDENT CLP PROTEASE	-	-	18	840	0.0
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	203	349	2.2E-9
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	707	721	8.1E-33
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	596	761	7.6E-42
Coils	Coil	Coil	-	-	473	493	-
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	165	496	1.1E-68
NCBIfam	TIGR03345	JCVI: type VI secretion system ATPase TssH	IPR017729	AAA+ ATPase ClpV1	13	849	0.0
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	348	543	2.0E-43
SUPERFAMILY	SSF81923	Double Clp-N motif	IPR036628	Clp, N-terminal domain superfamily	16	122	1.71E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.