Pseudomonas pelagia CL-AP6, K787_RS0107980

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004185 serine-type carboxypeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02113
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02113
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 36 476 2.3E-76
PANTHER PTHR30023 D-ALANYL-D-ALANINE CARBOXYPEPTIDASE IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 13 480 1.1E-96
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 438 451 3.5E-19
Gene3D G3DSA:3.40.710.10 - IPR012338 Beta-lactamase/transpeptidase-like 252 483 5.5E-54
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 73 92 3.5E-19
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 361 375 3.5E-19
Gene3D G3DSA:3.50.80.20 - - - 100 159 1.9E-15
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 301 323 3.5E-19
Gene3D G3DSA:3.40.710.10 - IPR012338 Beta-lactamase/transpeptidase-like 39 99 3.1E-6
NCBIfam TIGR00666 JCVI: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 60 460 2.8E-58
PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 376 390 3.5E-19
SUPERFAMILY SSF56601 beta-lactamase/transpeptidase-like IPR012338 Beta-lactamase/transpeptidase-like 41 479 1.27E-83

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.