Pseudomonas pelagia CL-AP6, K787_RS0106855
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas pelagia CL-AP6 111.KCCM90073.1_8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGAAGAAGGCCGCCTGCAGAAGGCTGGCGACAATGCCGCCCAGGTCACCCTGCAAATGGAGGACGGCAGCGTCTACCCACATCAGGGCGAGCTCGAGT TCTCTGAAGTATCGGTGGACGCCGGTACCAGCTCGGTGACCCTGCGCGCCGTATTCCCCAACCCGGACAAGGTGTTACTGCCGGGCATGTTTGTACATGC ACAGCTGGTCGCTGGCACCCGCGCTGAAGCCATTCTGGCGCCGCAGCAGGGCATCACCCGCACGCCCCGCGGCCAGGCCACGGCTTTGGTCGTCAATGCC GATAATATCGTCGAACTGCGTGAAGTGCGCACCGAACGCACCGTTGGCAATCATTGGTTGATCAGCGACGGGCTGAATGACGGTGACCAACTGATAACCG AAGGTCTGCAGTTCGTCAGACCCGGTGCCGAAGTCAGGGTGGTGCCCGCCGGTAACGTGGCTGAGCCCGCGTCCGCCGCTGGCCAGGAAGGATAATACCC
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| DNA Sequence for Gene |
>K787_RS0106855
ATGCCTCGTTTCTTTATCGATCGTCCAATCTTCGCCTGGGTTATTGCCCTGGTGATCATGCTGGCAGGGGGCCTGTCGGTACTCAGCCTGCCCATCAATC AATACCCGAGCATCGCGCCGCCAGCGGTGGGTATTTCCGTGACCTATCCTGGCGCCTCTGCGCAAACGGTGCAGGACACCGTCGTTCAGGTCATCGAGCA GCAACTGAACGGTATTGATGGCCTGCGCTATATCAGCTCGGACAGCAATTCCGACGGCAGTATGGAAATCACCGTGACCTTTGACCAGGGCGTGGACCCA GACATCGCTCAGGTGCAGGTGCAGAATAAGCTGCAACTGGCTACCCCGCTGCTGCCACAGGAGGTCCAGCAACAGGGCATCCGTGTGACCAAGTCGGTAC GCAACTTCCTGATGGTCATCGGCGTGGTGTCGACCGACGGCAGCATGAACCGCGATGACCTGGCTGATTACATCGTCTCCAACCTGCAGGACCCGGTATC GCGGACCGATGGTGTGGGTGATTTCCAGGTCTTTGGGGCACCGTACGCAATGCGTATCTGGCTGGACCCGGCCAAGCTGAACAATTTCAAGCTGACGCCC ACCGATGTTAGCGCCGCAATTCAGGCGCAGAACGTGCAGATTTCTTCCGGCCAGTTCGGTGGTCTGCCGGCTGTACCCGGGCAGCAACTGAGCGCGACCA TTATCGGCAAGACCCGGCTGCAAAGCCCCGAGCAGTTCCGCGAGATCATGCTCAAGGCCAACCCGGATGGCTCTCAGGTGCGTTTGAAGGATGTCGCACG CGTCGAGATGGGGGCGCAGAGCGCCAACGTGTCGGCCCAGTTCAACGGTATGCCGGCCTCCGGCCTGGCGATCAAGCTGGCCACCGGTGCTAACGCGCTG GACACCGCCGCCGCAGTCAAGCAGACCATCGCCGACCTGGAGCCGTTCTTCCCGCAGGGCTTGAAGATCGAATACCCCTATGAGACCGCGCCGGTTGTTT CGGCGTCCATCACCGGAGTGGTGCACACCCTGTTGGAAGCCGTGGTGCTGGTGTTCCTGGTGATGTATCTGTTCCTGCAGAACTTCCGCGCCACACTGAT ACCCACGCTAGCAGTGCCCGTGGTGATTCTTGGCACCTTTGGCGTGCTCTCGTTATTCGGCTTCACCATTAATATTCTGACCATGTTCGCCATGGTGCTG GCGATCGGCTTGCTGGTGGATGATGCCATCGTCGTGGTCGAAAACGTCGAACGCGTTATGGCCGAAGAGGGCCTGTCGCCGGTGGAAGCCACCCGCAAGT CGATGGATCAGATCCAGGGCGCGCTGGTAGGGATTGGTCTGGTGCTCTCGGCGGTATTTATTCCCATGGCCTTCTTTGGCGGTTCAACCGGGGTGATCTA CCGCCAATTCGCGATCACTATTGCCTCGGCGATGACGCTCTCGGTACTGGTGGCGATGATCTTTACCCCGGCGCTGTGCGCCACCATGCTCAAACCTATC CCTAAAGGCGGCCAGCATGAAAAGCGCGGTTTCTTCGGCTGGTTCAACCGCACCTTCGATCGTGGCGTGGGCCGCTACGAGCGTGGTGTGGCCAGTATGC TTAAGCGCAAAACGCCCTACCTGTTGCTGTATGTCGCTATTGTCGCAGTCATGGCGGTGCTCTTTTCCCGCATCCCTACCGCCTTTTTGCCGGACGAAGA CCAGGGCGTCCTTTACGCCCAGGTACAGACGCCAGCAGGTTCTACCGCCGAGCGCACCCAGCAGACAATCGACAGCATGCGCGACTACTTGCTGGAGGAA GAAAGCGATGTGGTCAACTCGGTGTTCACCGTGACCGGCTTCAACTTTGCCGGTCGCGGGCAGAACTCGGGCATGGCCTTTATCGGTCTCAAGCCCTGGG ACGAGCGCGCGAAGCCGGAGCAAAGCGTATTTGCATTGGCCGAGCGGGCCCAAGCGAAGTTCCGCAGTTATCGCGATGCGATGGTCTTCGCCTTCGCGCC GCCAGCGGTGATGGAGCTGGGTAACGCAACCGGCTTCAATCTGTACCTGCAGGACAATGCCGGGGTAGGTCACGACACCCTGATGCAGGCGCGCAATCAA CTGCTCGGCATGGCGGCACAACATCCGGTACTGATGGCCGTGCGCCCCAATGGCTTGGATGACGAGCCGCAATATCAGCTATCCGTAGACGACGAGAAGG CCCGCGTGCTCGGCGTTTCGCTGAGTGAAGTAAACAACACCCAGTCAATCGCCTGGGGCTCAAGCTACGTCAATGACTTTATCGACCGCGGCCGGGTCAA GCGCGTGTATCTGCAGGGCGAGGCCAACGCACGTATGGGCCCGGAGGATCTGGGCAAGTGGTTTGTGCGCAACGACAGCGGCGAGATGGTGCCATTTAAC GCCATTGCCAGCGGTGAGTGGATCTACGGGTCGCCCAAGCTGTCGCGCTATAACGGTGTGGCCGCAATGGAAATCATGGGTGAAGCCGCACCCGGTTTCA GCACTGGCGACGCGATGGCGGCGATAGAGGAGATTGCCCAAAAGCTACCGCCAGGGGTTGGCGTGGCCTGGACTGGCCTGTCCTACGAGGAGCGTATGTC CGGCGACCAGGCGCCCATGCTCTATGCCTTGTCCTTGCTGGTGGTGTTCCTCTGCCTGGCCGCGCTCTATGAGAGCTGGTCGATTCCGCTAGTAGTGATG CTCGTGGTACCACTGGGGGTCATCGGCGCCTTGATGGCTACGCTCGGCCGCGGACTGACCAATGACGTATTTTTCCAGGTCGGATTGCTGACTACTGTAG GTCTGACGGCGAAAAACGCGATTCTTATTGTCGAGTTCGCCAAGGACCTGCACGAGCAGGGCATGAGCCTGTTCGATGCGGCAGTGGAAGCCTGCCGCAT GCGTCTGCGGCCGATCATCATGACCTCGCTGGCCTTCACCCTCGGCGTTGTGCCCCTGGCCCTGGCCAGCGGAGCTGGCGCTGGCAGTTCGCATGCCATC GGTACCGGCGTTATCGGCGGGATGATCACCGCTACCGCGCTGGCGATCTTCTGGGTGCCGCTGTTCTTTGTGATGATTTCGTCGTTGTTCGGTGGCAAAA AAGCCAAGGCCAACGACACTGAGCCGACCGTCAAGGAGGTCACTCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCGCATTTTAATGGGTAGTAGCCTGATTCTGGCGCTGACTGGCTGCTCAATGATACCGGAATATGAGCGCCCGGCCTCGCCAGTAGCCGATGGCTGGTC GCAAGGCGAAACCTACCAAGCCGCCTCCGCCGAACAGCTGGCGCCGCCGGTATGGCAAAGCTTCTTTCGCGATCCACAACTGCGCCAGCTGATTGACGTG GCACTGGAGAACAACCGCGACTTGCGCGTGGCGGCATTGAACGTGGAGGCCACCCGCGCACTGTACCGCATTCAGCGCGCAGACCGGTTTCCCAGCTTGA GTGCCGACGCGGGTGGTAGCCGCACGCGTACACCATCCGATCTCAACGGTGCCGCGCAAAGCGGCATTACCAGCCAATACAACGCGACACTGGGCGTGGC TTGGGAGGTCGATCTGTTTGGCCGCGTAGGCAGCCTGCAGCAACAGGCGCTGGAAGAATATCTGGCTACCGAGGCCGCGCAACGCAGCGTTCAGGTTAGC
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| Amino Acid Sequence |
>multidrug transporter
MPRFFIDRPIFAWVIALVIMLAGGLSVLSLPINQYPSIAPPAVGISVTYPGASAQTVQDTVVQVIEQQLNGIDGLRYISSDSNSDGSMEITVTFDQGVDP DIAQVQVQNKLQLATPLLPQEVQQQGIRVTKSVRNFLMVIGVVSTDGSMNRDDLADYIVSNLQDPVSRTDGVGDFQVFGAPYAMRIWLDPAKLNNFKLTP TDVSAAIQAQNVQISSGQFGGLPAVPGQQLSATIIGKTRLQSPEQFREIMLKANPDGSQVRLKDVARVEMGAQSANVSAQFNGMPASGLAIKLATGANAL DTAAAVKQTIADLEPFFPQGLKIEYPYETAPVVSASITGVVHTLLEAVVLVFLVMYLFLQNFRATLIPTLAVPVVILGTFGVLSLFGFTINILTMFAMVL AIGLLVDDAIVVVENVERVMAEEGLSPVEATRKSMDQIQGALVGIGLVLSAVFIPMAFFGGSTGVIYRQFAITIASAMTLSVLVAMIFTPALCATMLKPI PKGGQHEKRGFFGWFNRTFDRGVGRYERGVASMLKRKTPYLLLYVAIVAVMAVLFSRIPTAFLPDEDQGVLYAQVQTPAGSTAERTQQTIDSMRDYLLEE ESDVVNSVFTVTGFNFAGRGQNSGMAFIGLKPWDERAKPEQSVFALAERAQAKFRSYRDAMVFAFAPPAVMELGNATGFNLYLQDNAGVGHDTLMQARNQ LLGMAAQHPVLMAVRPNGLDDEPQYQLSVDDEKARVLGVSLSEVNNTQSIAWGSSYVNDFIDRGRVKRVYLQGEANARMGPEDLGKWFVRNDSGEMVPFN AIASGEWIYGSPKLSRYNGVAAMEIMGEAAPGFSTGDAMAAIEEIAQKLPPGVGVAWTGLSYEERMSGDQAPMLYALSLLVVFLCLAALYESWSIPLVVM LVVPLGVIGALMATLGRGLTNDVFFQVGLLTTVGLTAKNAILIVEFAKDLHEQGMSLFDAAVEACRMRLRPIIMTSLAFTLGVVPLALASGAGAGSSHAI GTGVIGGMITATALAIFWVPLFFVMISSLFGGKKAKANDTEPTVKEVTL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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