Pseudomonas pelagia CL-AP6, K787_RS0106610
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas pelagia CL-AP6 111.KCCM90073.1_8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCTGCAGCGATGTCGACTGATGTTAGAAATGACCCCAAGGAAATAGGTTGGGAGGGATCGTTTCGCAGGTCTAGCTTCAACGCGGCGCGATCGAAAATC TCCTCTGCATCAACTCCTTGGCCATTGACGAAGGATGCGAAACCCAGTGCGACGGTTGCCATGACCGTAGCGGATCCGGTGGTGGAGTGGTTTGGATACG TGTACGGCATAACTAAACCCTCTATGGATTTTGCAAGACCAAGAGATAATGTAGTGCAATAAATGATCCACACGTTCCAATGGCCCGCTGAAGCTGCGGT GCCCGGCAATGCGCTCAAGTGTCGAGGCGCCAATTTAGTGCGTGGCGCCCCAGAGAAGTACACATCGCTGTTCTCAAATAACAAAAAGTTGTTCGCAAGG AGCAAGTCACTCCTTCCTGCTTTTCCTGATACTGAGGCCGTTAGAGCAATCCAATGGCACCGTCCCTAACTTGATGGGCCAAATATTCAGGAGACGTGGT
|
|
| DNA Sequence for Gene |
>K787_RS0106610
ATGAACGAAGCTGAGCGTAGCGGGCTGAAGGGTTCGCTTGGGGTGCCTTCCATCGTTTTGATGGTGGTCGCCACGGCGGCACCCTTGACGGTGATGGTGG CGAACTCACCGTTGATAATCATGATGGGCAACGGGGTTGCGGCTCCCGTGGACGCTCTGGTGGCGACGGTGATCATGTTTCTGTTCACCGTGGGGTTCGT CGCAATGTCAAAGTACATCACCAACGCGGGAGCGTTCTACGCCTACATACAAAAAGGGTTGGGACGCTCTGTCGGTCTCGGTTCTGCGGCATTGGCGGTT GTTTCCTATGCTCTGATTCTGGTCGCGCTTGACGCCTATATCGGTCACGCGCTGGCAGGCGCGATTGGCAATTTCACCGGCGTGGACATTCCCTGGTGGC TCTACTCGTTTATGGCTATTGGTGTGATTTCCTGGCTCGGTTATCGGGATATCGAACTCAGCTCCAAGTTTCTTGCCATTGCCCTGATTCTGGAAATCGC CGTGGTTGTCGTAGTTGATATCGCGGTATTCGTTGATAAAGGTCTGGCGGGTATGGAAGGCGCCGCGTTTGAGCCTGCCAACTTCATGGCTGGCTCGCCA GGCCTGGGCATTCTATTCGCGATTTTCAGTTTCATCGGTTTCGAGTCGACCGTCATCTATCGCGAAGAAGCGCGCGATCCCGAGCGAACAATTCCTCGCG CAACCTATACCGCCGTCTTTCTGGTGGGCGCCTTCTACATCGTATCCATGTGGTGTGCGGTCAGCGGTATCGGTGGTGACAACATCCCAGCCTATACTGA AGCCCACGGCGCTGATATGTATCTGGCGCTGACAGAATATTACCTCGGCATCGTGTTCATGGATGTCATGCAGGTATTGCTGATCACCAGCCTGTTTGCC TGTGCACTTTCCCTGCATAACATCGTCGTCCGTTACAAGTACACGCTCGGCCGCTTTGGCGTTATCAGCAACAGTTTTTCCAAAGTGCATCCCGCCCACG GCTCGCCGCATTTCTCTTCAATGGCGCTGACCCTGTTCAGTGTCGTGATGCTTACGGTTCTGGTCGCAATCGGTGCCGATCCTGCTACCGAGGTCTACGC CTGGGGTGCCATGGCGGGCACACTTGGCTACATGACCATCCTGTCACTAACCTGTGCCGCCGTTATCGTCTTCTTTCGCCGTCAGCCGGGCAACACTCAG TTCTGGAGCACACTGATTGCGCCGGCCGGTGGACTGATCGGCATTCTTGGCTGCCTCTGGATAGCCATAGCCAATCTGCCGGATCTGATCGGGGGGGACA ACGCCAGCACGGTCTCTGTTCTGGTGGTCCTGGCGCTGATTGCGACCTTTGCATTCGGCGTACTCACCGCCCAGCGCATGCGTCTGTTTCAACCATCACT GTATGACGCCCTGCGTGAGCTTGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCTCCCCCCAACACCCTCAATCTGAAAGGAGAAACGACATGTTGAACCGACTGCCCAATACCGCCACCGTTGAAGAGGTCAGTGCTTCGTTAAAGGAGCA TGGCTACGTCATCATTGATGAACTCGCCAGCCCGGAAATGATGAATAAGATAGCCGCGGAAATGGAGCCGCATATTCTTTCCACGCCGTTTGGCGAAGAC AGTTTTCTCGGCGCCCATACCCAGCGCTCTGGAGCGATGATTGCTCGCTCGGAAACCTCTCGTGAGCTGATCATGAACCCGCTGGTGATCGGCGTGGCAG GCAAGCACCTGCAGAGCGCCTCTACCTTCCAGTTGCATCTGACACAAGTGATCACGGTTAATCCGGGGGCTCCAGCGCAGGTGCTGCATCAGGATCAACT GGCCTGGGACTTCTTCCCTTTCCCCGATGATTTCGAAGTGCAATGCAACACCCTGTGGGCCATGACCGACTACACCGCAGAGAACGGTGCAACGCGGATA
|
|
| Amino Acid Sequence |
>amino acid permease
MNEAERSGLKGSLGVPSIVLMVVATAAPLTVMVANSPLIIMMGNGVAAPVDALVATVIMFLFTVGFVAMSKYITNAGAFYAYIQKGLGRSVGLGSAALAV VSYALILVALDAYIGHALAGAIGNFTGVDIPWWLYSFMAIGVISWLGYRDIELSSKFLAIALILEIAVVVVVDIAVFVDKGLAGMEGAAFEPANFMAGSP GLGILFAIFSFIGFESTVIYREEARDPERTIPRATYTAVFLVGAFYIVSMWCAVSGIGGDNIPAYTEAHGADMYLALTEYYLGIVFMDVMQVLLITSLFA CALSLHNIVVRYKYTLGRFGVISNSFSKVHPAHGSPHFSSMALTLFSVVMLTVLVAIGADPATEVYAWGAMAGTLGYMTILSLTCAAVIVFFRRQPGNTQ FWSTLIAPAGGLIGILGCLWIAIANLPDLIGGDNASTVSVLVVLALIATFAFGVLTAQRMRLFQPSLYDALRELA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|