Pseudomonas pelagia CL-AP6, K787_RS0105985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas pelagia CL-AP6 111.KCCM90073.1_6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCAACCAGAAGGGTTGTTTCAACGCATCGGAGGCGGGTTTGCGCGATGGAGAGTACCGGATTTCCGGTAAACTGACCGATGACACCCCTGGCAACTATC CTTCAATACCAGTGGCCTCATACGGGGGTAATCTGGTACTTGCGCCACCGAACGCCAGCGAATCCTGCCCTGCAGATCTGCCTGCCGACCAGCCCTGCGT TCTCGATCAGGAACCGACATTCGAACAGGCGTTTGCTGCTGGCGAGCCAGGCTTTGCAGGCGTTAAAGAATACTCGCCAGATGCTTCGACTGTGTTCGCG CAAAGCATCCTTTGGTACGCCGTGCCCTTTATCGGCGGTGCCTCCCTGGGCGAATCGGAAAATCCAGAATACGGTAACTTCCAGGCTGGCATTGGTCCAT CACGGCACGAAATAAATGCCACCTCTTCAGATGACGGCTGCCGTGTGGATCTGCGCTCAACGACTCTACGTGTCTACCTTTAATGCCAGGACAACAGATT
DNA Sequence for Gene
>K787_RS0105985
ATGAACTCATATAAAAGCCTGACCAAAGCGGCCTTGAGCTGCCTGGCATTTAGCCTCTATCTACACGGCGGAGTGGCCCACGCCGCTGCCCTGGACGTCA GCCAGCAGCCTTTGATGTTGGTGGACTCGGTAGCGCCCAACTTGATCTTCACCATTGATGACTCAGGCAGCATGAAGCGCTCACACGTGCCGGACAGCAT TGCTGCCGATGCCACTATGCGGACCAAAAGAGTTAAATCCGCAACTTTCAACCCAGCCTACTACGATCCCAATACCAGCTACATCATTCCCAAGGGCGTC GCAGTGAACGGTTCTGATATCATTTACGGCACCAGCTTTTCCAATGCATATCATATGGGCTTCAAAACCGGCTTGGGCAGTGCCAACCTGGCAACCAATT ACCGTGTGACGTGGTATTGCACAAGGGATCAGGTGGGTAACTGCGCTTACGGCACAAACGGCTTCAGTAACATCAAAGAATTGGCTGAGAATCCAGCGGA AGATTTCGACGTCAGCGCCAATCTGATCAATGGCGCATCCACAACTATCACCACCCCCGGCGGCATGGTCTACACGATTGAACGAACAGCCAATGCAACA TGCAGGGTTACCGGCGCAGGCTACGTCAACAGCGCCGCGCATTGTACGCAAAACAGTGGAGGTGGATCGCGTACCGCAAGTGTTAATTTACGCCAGCAAC CAGTCGCAGCCTATTATTATGTGTTTGATGCCACACGGGCAGGCTGTAGCATAACCTCCATCGGAAATGACGACTGCTACAGAGTGCAGTTAGTGGACAC TGCCGAACAGCAGAACTTTGCCACTTGGTATTCGTTCTATCGCGACCGCGCCCTGGCTACCCAGAGCGCTGCCCACCTGGCCTTCTACGATCTACCATCC GCCGTACGCTTTACCTGGCAGGCCCTGAACAACTGTACCAGCTTCAATAACGGTACCAACTGTAATGACAACCGCTTTCGCATTTTTGGCGACCGGCAGA AATCCAACTTTCTCAGTTGGTTAACTGACGTTTCCTTCTCAGGCGGTACGCCACTACGAGCGAGCCTCGATCGGGCCGGAAAATTCCTGGAAACCAATAC TGCGTGGGCTAACGAACCCAACCCTTTCAATCCCAGCGGTACCACTGGTAGTACAATTTCAAACCCTCAATACGCCTGCCGCCCAAGCTTCCATATCATG ATGACCGACGGCATATGGAACGGGGCAAATGGCTCACCTAATTCGACCCTGCGAGCCGACCATAGCAACTTCAACCTCCCAGACGGTCAGAGCTATTCAA ATAGCCGACGCCCCTATGCAGATGCGACGACCAATACACTTGCTGACCTGGCCATGCATTACTGGGCAACGGACTTGAATACAGGCCTTGACAATGAAGT GAAGCCTTATACACGTTTCACCAATACCAATGCAGCAACTCAATACTGGGATGCGCGAAACAATCCTGCTACCTGGCAGAACATGACCAACTACATGGTA GGCCTGGGGCTCGGGTCTTCATTGAATAATTCGTCCGTACCCTGGGAAAAGGACACTTTCCAGGGCGGTTATGCCAACATCCTCAATGGCACCGCCAATT GGCCTGCTGCTGGTGATAGCAACGCCAATAACGTCTATGACCTGTGGCATGCTGCGGTCAATTCACGCGGCGAGTTCTTCAGTGCCGACAGCCCTGAGGA GCTCGTCACTGCTTTCAACGACATTATTAATCGCATTGCTGAGCGCAACTCGACCGCAGGTCGGCCAGGCGTGTCCTCATCGGTCAGCCTGAACACTAGC GATCCGAGTGACATCAGTATCGTCAACCGTATCTTCGAGTCTTCTTATGACAGCACCGCCGGCTGGACTGGTGACTTGGTGCGCAAGGATGTCAGGCGTC TATCTAATGGTCTAGTCACCATTGACGAAGAATGGTCAGCATCAGAACGCATTACGGCCCAGGGCACTGGCCGAAACATTTATATGGGTGGCGATAGCGC TATCAGGCCTTTCAACTGGACCAACCTTAGCCCAGAGCAACAGGCCCTGTTCAACCTCAATCCTGACGGCCTGAGCGGAACTCCCGACGCCCGAGGCGGC GCTCGCGTTAACTATATAAGAGGCCACCGCGCAGGCGAAGGTACCGGTACCACTGACTTTCGCGCTCGTACCTCGGTATTCGGCGACATCATCAATTCCG CGCCAGCTGTGGTAGGTACAGCCGGTAATGTGCCCTACCTCATGGACCGTATTGACGGAGCCCGCGGCGAATATCTTGCATATCTTCGCCGGACTGCCGA TCGCCCCGAGCTGGTGTATGTTGGCGCCAACGATGGCATGCTGCATGCCATCCATACCGCTGACGGTGACGGTTACCTGGGTGGTGAGGAAGCCTTTGCC TTTATTCCCGACGCAGTGATAACCAACCTGCCAAGCCTGACCGGCCAAAGCTATCAGGGCGGCGAACACCGTTTCTTCGTCGATGGCAGCCCCATTGTTC GGGACGTCTATATCGGTGGCGAGTGGCGTACCGTGCTGGTAGGCACCCTGCGCGCCGGTGGCAAGTCTATCTTTGCACTGGACATTACCGACCCTGGGTC AGACGGTTCAGGGGTGGAATTGCTCTGGGAAATAAGTAATGAGAGCGACGATTACAGCGACCTCGGTTATACCTTCGCCCGCCCTGAAATTGTTCGTCTG CACAGTGGCCAATGGGCCGTACTGCTGGGCAACGGCTATGACAGCACCAACCCCGACACTGGCGTCAACGATGTCGCGGCGCTGTTTGTCATCGACATCA GTAACGGCGAGAAACTCACCCAGCTTACCGTCGACGACGGTTCTGACCTGCCCAACGGCCTGTCCAGCGTACGCGGCGCCGACAACAACAGTGACGGCAT TGTCGATTATGCTTATGCTGGTGATCTGCGCGGCAACCTTTGGCGCTTCGATCTGGTGAACACGGGGTCCTCCAGTGGGTCGGACCCCTTTGCCAGGGCA AATCATGAGTCAATTGATCCCAGTTCTTTCAGGGTCGCTTACGGCGGCCAGCCGATGTTCAAGGCGCGCTTCAACAGCGACGCTACCCTGCCGCAGTCCA TCACAGCCATACCGTCGCTGGTACGCCATCCGAGCCGTCTCGGCTATCTGGTCATTGTCGGTACCGGCAAGTATTTCGAAACATCAGATGCAGCGCCCGA CACCAGCAAGGCCAACAGCATCTACGCGGTATGGGACCGTTACACCCGCGCGCAAAATACCAGTGCAGCACTTGCACTAGCCAACCGTGGAAATATGGAA CAACGCACTATCACTAGCCAGGCGAATACCACCTTCACTGGGGACGCAGGGTCCACTACCAGCTTGATACGCGTCATCAGCGATGGTCGGGTGGAATGGT ACAACCCCGGCACTACGCCGATCCAGGAGGCAAGTGAAAGCAATGTTCGGCGACGCGGCTGGTTTTTAGACTTGAGAGTCGGCAGCAGTTCACTGGAGGG TGAGATGATGGTAAATGAGATGCTCGCTCGCGGAAATACGCTTCTCTTCGGTACCACAACCCCCAATGAGGATCCTTGTGCGGACGGGCTGACCAGCTTT ATCTATGGCATCAATGCACAAACTGGCGCCCGAACTTTGTTGCCGCCTTTCGACTTCAACCGCGATGGCAGAATTGACGCAGGTGACTCGACCTCGGCAG GGATTCCTCCTTCCGGCATCCAAATTGGAGCGCCCGGCGGCGTGGCGTTGACAGGGGATGGACTCATTTACGGCAATGATGACACTCTCGGTTTCTTCGT ACCCCCTGCAGAGCAGGGCCGCCAGACCTGGCAGTACCTGCTAGAGGAGACACCTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAGCCTGATCAAACTGAGAGAAAGCAGGGGCTTTACCCTGGTAGAGCTGATGATAGTAGTCGCCATCATCGGCATCCTCGCCGCCGTTGCATACCCCAG CTACCGCGAGTACGTGTTGCGCGGCAATCGTACAGAAGGACAGTCGCTCCTCGTCGAGGCCGCAGCGCGACAGGAGCGTTTCTATGCGCAGAACAACGCC TACCTCACGGATGATGCCAACCGTGGCCGTCTTGGCGTTAATGAGGGTCGCTACGCCGATCTCTATACTCTCGCCATTAGCCAAGTAGCCAATGACGGCG GCTATACTTTGACCGCAACACAGTTATTCAATGATGCTGACTGTGGCAACTTGACGCTAAATGCCAGGGGGGACAGGGGCCGTAGCGGAACTGGTCGAGC GTTGGACGAATGTTGGCGCTAAGCTGTTAATAAACTAAGTCATACTCAAAGTTACGTCGGGTTTACCTAGGGGCATACAGGAAGTAGCCCCTCTATCAAC
Amino Acid Sequence
>type IV fimbrial biogenesis protein PilY1
MNSYKSLTKAALSCLAFSLYLHGGVAHAAALDVSQQPLMLVDSVAPNLIFTIDDSGSMKRSHVPDSIAADATMRTKRVKSATFNPAYYDPNTSYIIPKGV AVNGSDIIYGTSFSNAYHMGFKTGLGSANLATNYRVTWYCTRDQVGNCAYGTNGFSNIKELAENPAEDFDVSANLINGASTTITTPGGMVYTIERTANAT CRVTGAGYVNSAAHCTQNSGGGSRTASVNLRQQPVAAYYYVFDATRAGCSITSIGNDDCYRVQLVDTAEQQNFATWYSFYRDRALATQSAAHLAFYDLPS AVRFTWQALNNCTSFNNGTNCNDNRFRIFGDRQKSNFLSWLTDVSFSGGTPLRASLDRAGKFLETNTAWANEPNPFNPSGTTGSTISNPQYACRPSFHIM MTDGIWNGANGSPNSTLRADHSNFNLPDGQSYSNSRRPYADATTNTLADLAMHYWATDLNTGLDNEVKPYTRFTNTNAATQYWDARNNPATWQNMTNYMV GLGLGSSLNNSSVPWEKDTFQGGYANILNGTANWPAAGDSNANNVYDLWHAAVNSRGEFFSADSPEELVTAFNDIINRIAERNSTAGRPGVSSSVSLNTS DPSDISIVNRIFESSYDSTAGWTGDLVRKDVRRLSNGLVTIDEEWSASERITAQGTGRNIYMGGDSAIRPFNWTNLSPEQQALFNLNPDGLSGTPDARGG ARVNYIRGHRAGEGTGTTDFRARTSVFGDIINSAPAVVGTAGNVPYLMDRIDGARGEYLAYLRRTADRPELVYVGANDGMLHAIHTADGDGYLGGEEAFA FIPDAVITNLPSLTGQSYQGGEHRFFVDGSPIVRDVYIGGEWRTVLVGTLRAGGKSIFALDITDPGSDGSGVELLWEISNESDDYSDLGYTFARPEIVRL HSGQWAVLLGNGYDSTNPDTGVNDVAALFVIDISNGEKLTQLTVDDGSDLPNGLSSVRGADNNSDGIVDYAYAGDLRGNLWRFDLVNTGSSSGSDPFARA NHESIDPSSFRVAYGGQPMFKARFNSDATLPQSITAIPSLVRHPSRLGYLVIVGTGKYFETSDAAPDTSKANSIYAVWDRYTRAQNTSAALALANRGNME QRTITSQANTTFTGDAGSTTSLIRVISDGRVEWYNPGTTPIQEASESNVRRRGWFLDLRVGSSSLEGEMMVNEMLARGNTLLFGTTTPNEDPCADGLTSF IYGINAQTGARTLLPPFDFNRDGRIDAGDSTSAGIPPSGIQIGAPGGVALTGDGLIYGNDDTLGFFVPPAEQGRQTWQYLLEETP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site