Pseudomonas pelagia CL-AP6, K787_RS0103045

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00725
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00725
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.710.10 - IPR012338 Beta-lactamase/transpeptidase-like 32 290 4.0E-91
PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A 159 172 2.1E-17
PANTHER PTHR21581 D-ALANYL-D-ALANINE CARBOXYPEPTIDASE - - 26 296 3.5E-43
PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A 79 90 2.1E-17
Gene3D G3DSA:2.60.410.10 - IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily 292 382 2.8E-24
Pfam PF07943 Penicillin-binding protein 5, C-terminal domain IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal 292 382 4.1E-21
SMART SM00936 PBP5_C_2 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal 292 382 2.0E-29
Pfam PF00768 D-alanyl-D-alanine carboxypeptidase IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal 46 271 2.6E-85
SUPERFAMILY SSF56601 beta-lactamase/transpeptidase-like IPR012338 Beta-lactamase/transpeptidase-like 43 342 1.17E-84
PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A 132 149 2.1E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.