Pseudomonas sp. PAMC 25886, MUM_RS0131050 (hscA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PAMC 25886 ctg7180000004568, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCGCTACCGTGAACTGGCGCGTGGGGTGCATCCGGACCGCTTCGCTGACGCTTCCGAGCGTGAGCAACGCCTGGCGCTGGAGCAATCAGCCAGCCTCAA CGAAGCCTATCAGACGCTCAAGAACCCTCCCAAACGCGCGCGCTACCTGCTCGCCATGGGCGGTCGCGAGCTGCCGCTTGAAGTCACGGTCCAGGACCCT GATTTCCTGATGCAGCAGATGCAATGGCGCGAAGAGCTCGAAGAACTGCAGGACGAAGCCGATCTGGCCGGAATCGCAGTCTTCAAGCGCCGTCTGAAAG TGGCCCAGGATGAACTCAACGAAAGCTTCGCAGCCTGTTGGGATGATGCAGCGCAACGTGAGCAGGCCGAACGCCTGATGCGGCGCATGCAGTTCCTCGA CAAGCTCACCTACGAAGTGCGCCAGTTAGAAGAGCGCCTCGACGATTAACCCAGTGCCGCCCAGGTTGCACGCCTGATATACAGATAAGTCCTGATTACC
DNA Sequence for Gene
>MUM_RS0131050 |hscA
ATGGCCCTACTGCAGATCGCCGAACCCGGTCAAAGTCCTCAACCGCACCAGCGTCGTCTGGCGGTCGGGATTGACTTGGGCACTACCAATTCGCTGGTCG CTGCATTGCGCAGCGGTCTTTCCGAGCCGCTGCCCGACGCTGATGGCCAAGTCATCCTGCCGTCTGCCGTGCGCTATCACGCCGATCGCATCGAAGTGGG CGAGTCGGCCAAGCTGGCGGCGTCTACCGATCCCCTGAACACCGTGTTGTCGGTCAAGCGCTTGATGGGTCGTGGTCTGTCCGACGTCAAGCAACTGGGC GACCAGCTGCCGTACCGCTTTGTCGGCGGCGAATCCCATATGCCGTTCATCGACACCGTCCAGGGCCCGAAAAGCCCGGTGGAAGTGTCGGCTGATATCC TCAAGGTGCTGCGTCAGCGCGCAGAAACCACCCTGGGCGGCGAACTGGTGGGGGCGGTGATTACTGTTCCTGCGTATTTCGATGACGCTCAGCGCCAGGC CACCAAGGATGCGGCGAAACTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAGCCGACCGCGGCCGCTGTGGCTTACGGCCTGGATCAGCACGCCGAA GGCCTGGTCGCTATTTACGACCTGGGCGGCGGTACCTTTGATATTTCGATTCTGCGCCTGACCGGCGGTGTCTTCGAAGTGCTGGCTACCGGTGGCGATA CGGCCCTGGGTGGCGATGACTTCGATCACGCCATCGCTGGCTGGATCATCACCAGCGCCGGCTTGTCTGCCGACCTGGATCCGGGCGCGCAACGTAACCT GCTGCAAACCGCTTGCGCCGCTAAAGAAGCCCTGACTGATGCTGCATCGGTTGAAGTTTCCTACGGTAGTTGGTCTGCTCAGCTGACCCGCGAAGCCTTT GATTCGTTGATCGAACCGATGGTCGCCCGCAGTCTGAAAGCCTGCCGTCGCGCGGTGCGTGACTCGGGTGTCGAGTTGGAAGACGTGGCTGCTGTGGTCA TGGTGGGTGGTTCGACCCGCGTGCCACGTGTCCGCGAAGCTGTTGCTGAAGCCTTTGGTCGCCAACCGCTGACCGAAATCGACCCGGATCAAGTGGTGGC CATTGGTGCCGCGATCCAGGCCGATACCCTCGCCGGTAACAAGCGCGATGGTGGCGAACTGCTTCTTCTCGACGTGATTCCGTTGTCCCTGGGGCTGGAA ACCATGGGCGGCCTGATGGAGAAGGTGATTCCACGCAACACCACCATCCCCGTTGCTCGCGCCCAGGACTTCACCACCTACAAAGATGGCCAGACGGCCA TGATGATTCATGTGCTGCAAGGCGAGCGTGAGTTGATCAGCGACTGCCGTTCCCTGGCACGCTTCGAGTTGCGCGGTATTCCAGCGATGGTGGCCGGTGC GGCGAAGATTCGCGTGACCTTCCAGGTCGACGCCGACGGCTTGCTCAGCGTTGCTGCGCGCGAATTGGCCTCCGGCGTCGAAGCCAGCATCCAGGTCAAG CCGTCCTACGGCCTGACCGACGGCGAAATCGCCAAGATGCTCAAGGATTCGTTCCAGTACGCCGGTGACGACAAGGTCGCCCGCGTGTTGCGTGAGCAGC AAGTTGACGCCCAGCGGCTGCTTGAGGCGGTGCAGGGCGCCCTTGATGCCGACGGTGAGCGTCTTCTGGATGCCGAAGAGCGCATGGTCATCGACCTGCA AATGCAGGAACTGGCTGAATTGATGAAAGGCACCGATGGTTACGCCATCGAGCAACAGACCAAGCGCCTGTCGCAAGTGACCGATGCCTTTGCCGCCCGT CGTATGGACCAGACGGTGAAAGCCGCCCTGGCGGGCCGCAACTTGAACGAACTTGAGGATTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGATGCCGCAGATCATTTTTCTGCCACACGCCGAGCATTGCCCGGACGGTATGGTTGTGGAGGCTGAGACCGGCAAGTCCATTCTCGAAGTCGCTCACG ACAACCACATCGAGATCGAAAGCGCCTGCGGCGGCGTCAACGCCTGTACCACCTGCCACTGCATCGTCCGCGAAGGTTTCAACAGTCTCGAAGAAGCTGA TGAGCTGGAAGAGGACTATCTTGATAGGGCGTGGGGCCTTGAGCCGACATCGCGCTTGAGCTGCCAGGCAAAAGTGGGAACAGAAGACCTTACCGTCGAG ATCCCGAAATACTCGCTCAACCATGCCGCCGAAGCGCCGCACTGATTCAAGGAAGCGTCATGAGTCTTAAATGGGTTGAAGTGCAAGAAATTGCTATTCA GTTGGCGGACAAATACCCGGATACGGATCCCTATTCGGTGAACTTCGTCAAATTGCGTCAGATGGTCATGGAACTGCCCGAATTCGATGATATTCCTGAT
Amino Acid Sequence
>chaperone protein HscA
MALLQIAEPGQSPQPHQRRLAVGIDLGTTNSLVAALRSGLSEPLPDADGQVILPSAVRYHADRIEVGESAKLAASTDPLNTVLSVKRLMGRGLSDVKQLG DQLPYRFVGGESHMPFIDTVQGPKSPVEVSADILKVLRQRAETTLGGELVGAVITVPAYFDDAQRQATKDAAKLAGLNVLRLLNEPTAAAVAYGLDQHAE GLVAIYDLGGGTFDISILRLTGGVFEVLATGGDTALGGDDFDHAIAGWIITSAGLSADLDPGAQRNLLQTACAAKEALTDAASVEVSYGSWSAQLTREAF DSLIEPMVARSLKACRRAVRDSGVELEDVAAVVMVGGSTRVPRVREAVAEAFGRQPLTEIDPDQVVAIGAAIQADTLAGNKRDGGELLLLDVIPLSLGLE TMGGLMEKVIPRNTTIPVARAQDFTTYKDGQTAMMIHVLQGERELISDCRSLARFELRGIPAMVAGAAKIRVTFQVDADGLLSVAARELASGVEASIQVK PSYGLTDGEIAKMLKDSFQYAGDDKVARVLREQQVDAQRLLEAVQGALDADGERLLDAEERMVIDLQMQELAELMKGTDGYAIEQQTKRLSQVTDAFAAR RMDQTVKAALAGRNLNELED
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site