Pseudomonas sp. PAMC 25886, MUM_RS0128370
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004560, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCAATACGGGCTGAGCCCGGTGACTGCCGGGTACTACACCGCCGCCTGTGTGTTTGGTGGCAGCCTGATGCGGCCATTAGGCGGCGCGCTGGCTGACC GTTTTGGCGGGATTCGCACCCTGCTGGGCATGTACGGCGTGGCAGCGATCTGCATCGCGGCGGTGGGGTTCAACCTGCCAAGCTCCTACGCAGCACTGGC GCTTTTCGTGTGCACCATGCTCGGTTTGGGTGCCGGTAACGGTGCAGTCTTCCAGCTGGTGCCCCAGCGTTTTCACCGGGAGATCGGCGTAATGACCGGC CTGATCGGCATGGCCGGCGGTATCGGCGGTTTCGCCCTGGCCGCGGGCATGGGCGCGATCAAGCAAAGCACCGGCAGCTATCAGTTGGCCCTGTGGTTGT TCGCCAGCCTGGGCGTGCTGGCCTGGTTCGGCCTGTATGGCGTTAAACGTCGCTGGAGAACCACTTGGGGCTCGGCAGCGGTGACGGCTGCACGCGTCTG
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| DNA Sequence for Gene |
>MUM_RS0128370
ATGACCCTGCAACTGAGCTTCGCCCAGGCCAGCGCCACCGGCCCACGGCAGGAAAACCAGGACGCCGTGCGCCTGGTCACTCCCGCCGCTGAGTTGGCCG CCAGCAAAGGTTATCTGTGTGCCATCGCCGACGGTGTCAGCCAATGTGCCGATGGCGGACTGGCCGCGCGCTCGACCTTGCAGGCCCTGGCCCTGGACTA TTACGCCACGCCGCAAACCTGGGGCGTGGCCCAGGCGCTGGAGCGCTTGCTGGTGGCGCAGAATCGCTGGTTGCAGGCCAACGGTGGCGGCCTGCCACTG CTCACCACCCTCAGTGCCCTGGTGTTTCGCGGGCAGCGTTTCACCCTGGCCCATGTGGGTGATTGCCGGGTGTATCGCTGGCTCGATGGCGAGTTGCAAC GCCTCAGCGAAGAGCATGTGTGGGAACAACCGGGCATGCAGCATGTGCTCAAGCGCGCCATGGGCCTGGATCAACACCTGGTGCTGGATTTCCTCGACGG CGAGTTGCGGGCGGGCGAATGTTTTCTGCTGCTCAGCGACGGCGTGTGGGCGACCCTGGGGGATCACGCCATTGGCGCGATCCTGCGGGAGCAGTCAAAT CTGGACCTGGCCGTGAACACCCTGGTCAGCGCCGCGCACCTGGCGGGCAGCCAGGACAATGCCAGCGCTTTGCTGGTGCGGGTTGACCAGCTCGGCGCCG CCACCCTCGGGGATGCACTGGTGCAGTTGCAGCAATGGCCACTGCCGCCGCCCCTCAAAATCGGGCAACACTTCGAAGGCTGGCAGGTGGAAGCGCTGCT GGGGCAAAGTCGTCAGTCCCTGCTCTATCGGGTACGCGACGCCCAGCAACAGGCCTGGTTGCTGAAGACCTTGCCGGTCAGCCATGACGACGACGTGTTC GCCGCCCAGGCCCTGTTGTCGGAGGAATGGTTCCTGCGCCGGGTCGCTGGCCGCGCATTTCCTGAAGTCCATCAGGCCAGCGGCCGTCAGCATTTGTACT ACGTGATGCGTGAATACGCCGGGCAAACCCTGGCCGAACTCTTCAAACACCAGGGCCCATTACCCCTGGCGCAGTGGCAATCCCTGGCCGAGCGCCTGTT GCGCGCGGTCGGGCTGCTGCACCGCAGGCAGATCCTGCACCGCGACATCAAGCCGGAAAACCTGCTGCTGGGTGACGATGGCGAATTGCGCGTGCTGGAC TTCGGCCTGGCCTACTGCCCCGGGCTCTCCGAGGATCGCGCGCACCTGTTGCCGGGCACGCCGAGCTTTATCGCGCCGGAAGCCTTCAATGGCGAACGCC CTACGCCGCAGCAGGATCTGTATAGCGTCGGCGTGACTTTGTATTACCTGCTGACCGGGCATTATCCCTACGGCGAAATCGAAGCATTCCAACGCCCCAG GTTCACCACGCCGGTCAGCGCCAGCCGTTACCGCCCCGACCTGCCCGACTGGTTGCAACAGAGCCTGGAACGCGCAGTCGCCGCCCAGCCTGAACAACGT TATGAAACCGCCGAGGAGTGGTTGCGGGTGCTGGAGCAGGCAGACCGACGCGAGTTGAGCATGCGGCCAAAACCGCTGCTGGAGCGCGAGCCGCTCAAGG TCTGGCAAACCTTGGCCGTGCTGTCGTTGCTGATCAATCTGGTGCTGTTGTACTGGCTGTTGCACCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGGCGAAATTTCTCGATATTTGGACGCCAGGCTCAACAAATCAGGCCAAACCGCCACTTGGCACAACCACTGCATTAGCTTTCCCATCAACACACATAT AGCCGCGCCTTCAACGTCGAAGGTCGAGCTTCCCGAGAGAACGGGACCAGGACAAAGGCGTCCTCGCTACTTGCGTAGCGGGGACGCCTTTTTTTGTTGC GCACGATTTGTCGAGCCACTGCGGAGAACGACATGAAGAAACTCAAACTGGTGATGATCGGCAACGGCATGGCCGGGGTTCGCACCCTTGAAGAATTGCT CAAGCTGAGCAGCGACCTGTACGACATCACCGTCTTCGGCGCTGAACCCCACACCAATTACAACCGCATCCTGCTGTCGCCGGTGCTGGCCGGTGAGCAG ACCTTCGAAGAGATCGTGCTCAATGATTTGAGCTGGTACCTCGATAACAACATCAAGCTGCTGCTCAACCGCAAAGTGGTGCAGATCGACCGGGTCAAAC
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| Amino Acid Sequence |
>protein kinase
MTLQLSFAQASATGPRQENQDAVRLVTPAAELAASKGYLCAIADGVSQCADGGLAARSTLQALALDYYATPQTWGVAQALERLLVAQNRWLQANGGGLPL LTTLSALVFRGQRFTLAHVGDCRVYRWLDGELQRLSEEHVWEQPGMQHVLKRAMGLDQHLVLDFLDGELRAGECFLLLSDGVWATLGDHAIGAILREQSN LDLAVNTLVSAAHLAGSQDNASALLVRVDQLGAATLGDALVQLQQWPLPPPLKIGQHFEGWQVEALLGQSRQSLLYRVRDAQQQAWLLKTLPVSHDDDVF AAQALLSEEWFLRRVAGRAFPEVHQASGRQHLYYVMREYAGQTLAELFKHQGPLPLAQWQSLAERLLRAVGLLHRRQILHRDIKPENLLLGDDGELRVLD FGLAYCPGLSEDRAHLLPGTPSFIAPEAFNGERPTPQQDLYSVGVTLYYLLTGHYPYGEIEAFQRPRFTTPVSASRYRPDLPDWLQQSLERAVAAQPEQR YETAEEWLRVLEQADRRELSMRPKPLLEREPLKVWQTLAVLSLLINLVLLYWLLHH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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