Pseudomonas sp. PAMC 25886, MUM_RS0125640
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004557, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AACCCGGGAGCCTGGAAGCTGAAGGTATCCAGCCAGATCCCGGTGCACTTTTTCTCCCGCGCCAGGTCCTCGGCCGCCTGCATCAGCTTTGAACCGGTGC CTTGAGTGCGCATCGACTCAGGCACGCTCAACAGCTCAACGAACATCCAGCCATAAGAGATTTTCCCGTAGAGACCACCCACCACGTCCTGGCTGACGGG ATCACGCAGCAACAACCCGAAGGTTTCAAACGGGTTCTCGCCGCATTGGCTGATGTTGTAGGCCCTCAGTGGCTGGAGGATGGCCTGGCGCTCTTGCTCC GTGACGTCAAAAGACAACTCTATCGCTGATGCCATCTCAATCTCCCTGATGTGAATACCCAATCCCGAGGACATTACCAGCGATAGCCACCTGTCGCATA CGGAACACTCTTTACGCCCTCAGCTATACGCAGGTCGCAACCGCCCCAGGGCAACTACATCGCCGGCGGTACTCTGGGATGATCACCCGGGAGATTTCCA
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| DNA Sequence for Gene |
>MUM_RS0125640
ATGACTCTACGCGCTTGCTTGGCCGCTCTATTGGTACTGACCGCCTCCACCGCCTTTGCCGCCCCGCGCTACGATCACCTGTATGCATTCGGTGACAGCT ACTCCGACAACGGTGCAGGTGAACGCTTCACCAAAACCCTGGCCACGCAGAAGGTCAAGGATGCGCAGGAACTGCCCGGCTCGCTGTATTGGAAAGGCCG CTGGAGCAACGGCCCGACGGCCGTCGAGAACCTGGCTCACGCCTTGAAAACGCCCTTGACCGACTACGCAGTGGGCGGTGCCAAGAGTGGCAACGGCAAC TATTACGCCTGGATGGAACCGGCACGCGACACCGGCGTTTCGGGCCAGATCGCCGACTACCTGAAATCCGCCAACTCACACAAGGCAGACCCGAACGCGC TGTATTTCATTTTCATCTCGGCCAACGACTTTTTTGAATGGGCCGACTTCTCGCACCCGGAGTCGGTTGCCGTGCTCAGCCAGAACAGCGTGGCGAACAT TCAAAAAGCCACCGAGACGCTGCTTGCCGCAGGCGCCAAACACGTGATGGTAGTCGGCACCACGGATTTGAGTCATGTCCCGGCGGTGGTACAGGGTAAT CAAGTCGAGAATGCAAAAAGCTACCAGCAGGCGCTCGAACAGAAATTGCCGGTGGTGCTGAGTACATTGGCTAAAACCCACCAGGTCAGCATCCGCTACT TCGACCATGTGGCCTTCAGCGACAAGCTGCGTGCGGCGCCCGAGGCTGCGGGGTTGAAAGACCTGGATACGCCCTGCCAACACACCTATCCAGACGTGAA GCCGGTGTGTGAAAACCCGGATGCACATTACTACTGGGATGAATGGCACCCGACGCGCAAGGTGCATGCGCTGGCGGCGGAGGCGATGTTTGAAACGCTG AAGGCTGGCCAGGGTATTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACAAGGTCACACGGCCCTATTGAATCAAGGCGAACACCCACCGACGACCGCTTCTCTTCTGAACGACTCAGGCGCCCGCCCGGTATTTTTGTCGGTGATC TCCACCACGCAGCCACTCACGGGAACCGCCTGGACGATTTGATAAGTCGCGCCAACGGCAGGGATAAAACTGGCGACGTTGGCGCAACTGCGAAAATAGT TTTCGCCTTTCTTGTTGGCGCCACCGCTGCTCATGACGTTGACGTAGATGCGCCGGTCGGGGATCAGTAAAAACCGCTCGCTGACCTCGCCTTTGCGAGT GCCCAGCACGCCGGTCTCGGCCGTGTCATTGCAGCCCGGGTCGTAGTAGGCCCAATACATTTGCACGCCACCGTTCAACAGGGTGTTAGTGCCCGGGATA GCTTCGAGCGTTGCATGAGGCGCGGTGGGGGCTGGTTGTTGGTAAAAACCGACACAACCTGTCGCCAGGCTGCAGAACAGTGCCAATAAGACCTTTTTCA
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| Amino Acid Sequence |
>GDSL family lipase
MTLRACLAALLVLTASTAFAAPRYDHLYAFGDSYSDNGAGERFTKTLATQKVKDAQELPGSLYWKGRWSNGPTAVENLAHALKTPLTDYAVGGAKSGNGN YYAWMEPARDTGVSGQIADYLKSANSHKADPNALYFIFISANDFFEWADFSHPESVAVLSQNSVANIQKATETLLAAGAKHVMVVGTTDLSHVPAVVQGN QVENAKSYQQALEQKLPVVLSTLAKTHQVSIRYFDHVAFSDKLRAAPEAAGLKDLDTPCQHTYPDVKPVCENPDAHYYWDEWHPTRKVHALAAEAMFETL KAGQGI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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