Strain | Pseudomonas sp. PAMC 25886 ctg7180000004549, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCCTGATGCTCACCGCGCGCAACGACGAAACCGACCGCATCATCGGCCTCGAAATGGGCGCCGACGACTACCTGGTCAAGCCCTTCGCTGCCCGTGAAC TGCTGGCCCGCATCAACGCCGTGCTGCGGCGCACCCGGATGCTGCCGCCGAACCTGGTGGTGACGGAAAGCGGCCGGCTGATCCGCTTTGGTCGTTGGCG CCTGGACACCACCGCCCGCCATCTGCTGGACGAAGACGACACCCTGGTGGCCTTGAGCGGCGCCGAATACCGCCTGCTGCGAGTGTTTCTCGACCACCCG CAACGGGTGCTCAACCGCGACCAGTTGCTGAACCTGACCCAGGGCCGGGACGCGGACCTGTTCGACCGTTCCATCGACCTGCTGGTCAGCCGTTTGCGCC AGCGCCTGCTGGATGACGCCCGCGAGCCGGCCTACATCAAGACCGTGCGCAGCGAAGGCTATGTGTTCTCCCTGGCGGTGGAAATCCTCGGGGACTCGGC
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DNA Sequence for Gene |
>MUM_RS0124725
ATGACCCTTTCGTTTCGCTGGCCGCGCACCCTGGCGGCGCAACTGTCGGTGATTTTCATCGTCAGCCTGCTGTGCGCCAACGCCCTGTCGTTCAGCGCGC AGTTCTATGAGCGCTACATGAGCGCCCGCAGCGTGATGCTGGGCAACCTGGAGAACGACGTATCCACGTCCATCGCGATCCTCGACCGCCTGCCCGCCGC CGAGCGCGCCAGTTGGCTGCCGCGCCTCGACCGCAACGCCTACCGCTACCTGCTGAATGCCGGCGAACCCGGCGAGCCGATGGCCAGCGACGACGTGCCC ATGGCCGCGACCTCGATTTCCGATGCCTTGGGCGAGCATTACCCGCTGACCTTTCGCGACATCCCGGGCCTGCAAAAACACTTCCAGGCGCACCTGACCC TGGCCGATGGCAGCCCGGTCACCATTGACGTCTACCCCAAGCCGATCCCGTTTGCCTTCTGGTTGCCGGTGGTGCTGGTGCTGCAGTTGCTGGTGCTGCT GGTCTGCACCTGGGTCGCCGTGCGCATCGCCATCCGCCCGCTGACACGCCTGGCACAGGCGGTGGAAACCCTTGACCCGAATGCGCACCCTACGCCACTG GACGAAACCGGCCCCACTGAAGTGGCGCATGCGGCGGCGGCGTTCAACGAAATGCAAAAGCGGATTGCCGAGTACCTCAAGGAGCGCATGCAGATTCTGG CGGCGATCTCCCACGACTTGCAGACGCCGATCACCCGCATGAAATTGCGTGCCGAGTTCATGGAAGACTCGGTAGACCGGGAAAAGCTCTGGAGCGACCT GGGGGAAATGGAGCACCTGGTGCGCGAAGGCGTGGCCTATGCCCGCAGCGTGCATGGCGCGACCGAAGCCAGCCACCGGATCAACCTCGACGCGTTTCTC GACAGCCTGGTGTTTGATTACCAGGACATGAACAAGCAAGTCAGCCTGAGCGGCAAAAGCGCAGTGGTGCTGGATACCCGGCCCCATGCGTTGCGCCGGG TGCTGGTGAACCTGGTGGACAACGCACTGAAATTTGCCGGGGCGGCGCAGATGGAGGTGGGTTCGACATCGTCCGGGGAGCTGTCGATCAAAGTGCTGGA TCGGGGCCCGGGGATTGCCGAGGATGAACTGGTGCAGGTGATGCAGCCGTTTTACCGGGTGGAGAGCTCGCGCAATCGCGGCACGGGGGGCACCGGGCTG GGGCTGGCGATCGCCCAGCAACTGGCTGTGGCGATTGGCGGGGAGTTGACCCTGAGCAATCGGGATGGCGGTGGGTTGTGTGCCGAGGTTCGGCTGGTGC TGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGGCTGTGTGTGTATCCGTTATTTGGGTGATGGCTGATATCGGTTCCGCTCTTACAGCGGGTCACTTTTGAAAAGCCCAAAAGTAACCAAAAGGCTCTT GCCCCACCACTCGGCACCTCGCCTAGGCTCGGTGTGCCCTCACTCCGGCATTA
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Amino Acid Sequence |
>ATPase
MTLSFRWPRTLAAQLSVIFIVSLLCANALSFSAQFYERYMSARSVMLGNLENDVSTSIAILDRLPAAERASWLPRLDRNAYRYLLNAGEPGEPMASDDVP MAATSISDALGEHYPLTFRDIPGLQKHFQAHLTLADGSPVTIDVYPKPIPFAFWLPVVLVLQLLVLLVCTWVAVRIAIRPLTRLAQAVETLDPNAHPTPL DETGPTEVAHAAAAFNEMQKRIAEYLKERMQILAAISHDLQTPITRMKLRAEFMEDSVDREKLWSDLGEMEHLVREGVAYARSVHGATEASHRINLDAFL DSLVFDYQDMNKQVSLSGKSAVVLDTRPHALRRVLVNLVDNALKFAGAAQMEVGSTSSGELSIKVLDRGPGIAEDELVQVMQPFYRVESSRNRGTGGTGL GLAIAQQLAVAIGGELTLSNRDGGGLCAEVRLVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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