Pseudomonas sp. PAMC 25886, MUM_RS0124225
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004546, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCCGCAGTGGTTTCAGGATTTGCTGGAAGCGCTGAAAAGCCTCGGTTTGAAAGTCGCCCTGGACACCAGCGGCGAAGCGCTGCGCGCTGGATTGAAGG CCGGCCCGTGGTTGGTCAAACCCAATACCGAAGAACTGGCCGATGCCCTCGGTCATTCCACGGATGCCATCCGCCAACTGCATCGGCAAGGTGTGGAGCA TGTGGTGGTCTCCGACGGTGCCGCAGGCGTGAGCTGGTACAGCCCGGAAACGGCGCTGCACGCCACGCCACCCAAGGTAACGGTGGCCAGTACCGTAGGC GCCGGCGACTCGCTGTTGGCCGGGATGCTTCATGGGTTGCTCAGTGGCGATACGCTGGAGCTGACCCTGCGCCGCGCCACCGCAATTGCCGCGATGGCGG TCACGCAAATCGGCTTTGGCATCACCGACGACGCACAGCTTGAGACTTTGCAGAGCGGCGTCCACGTGCGCCCGCTGACAGAACAATAAGAGGGTTGGTC
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| DNA Sequence for Gene |
>MUM_RS0124225
ATGAAGTTAGCCATTGTTACTGCCTGCCCGAACGGCATGGTCACCAGTGTGCTGTGCGCCCGCTTGCTGGACGCCGCCGCGCAACGCCAGGGCTGGAGCA CCAGCGTCGAAGTGGTCGATGTGCAGCACCCGGAACGCCAATTGTCGGCGGCCACCATTGAAGCCGCCGAGTGGGTGTTGCTGGTCAGCAGCACGCCGGT GGACATGCAGCGTTTTGTTGGCAAGCGCGTATTCCGCAGCACGCCGGCCCAGGCGCTGCAGGATGTGGACGCGGTGTTGCGTCGCGGGGCCGAAGAGGCC CAGGTGCAGGTGGCGGAGGCGGCACCCACCAAAAGTGCGCCGCGCATCGTGGCGATCACGGCGTGCCCTACCGGCGTTGCCCATACCTTCATGGCCGCCG AGGCGTTGCAGCAAACCGCCAAGCGCCTGGGTTATGACCTGCAGGTGGAAACCCAGGGTTCGGTGGGCGCCCGCACGCCGCTGAGTCCCGAAGCGATTCG TGACGCTGATGTGGTGCTGCTGGCGGCCGATATCGAAGTCGCCACCGAGCGGTTTGCCGGCAAGAAAATCTATCGCTGTGGCACCGGGATCGCGCTCAAG CAATCGGAAGCCACCCTCAACAAGGCCCTGGCCGAAGGCAAGCAGGAATCTGCCGCCAGCGGTGCCGCTGCCAAGCCGGAGAAAACCGGTGTCTACAAAC ACCTGCTCACCGGTGTGTCGTTCATGCTGCCGATGGTGGTGGCAGGCGGTCTGCTGATCGCCCTGTCGTTTGTGTTCGGCATTCATGCCTTTGAAGAAAA AGGCACCCTGGCCGCCGCACTGAAAACCGTCGGCGACCAGGCCTTTATGCTGATGGTGCCGTTGTTGGCGGGTTACATCGCCTACTCGATTGCCGACCGT CCTGGCCTGGCGCCGGGCATGATCGGCGGCCTGCTGGCCAGCACCTTGGGCGCGGGTTTTATCGGCGGGATATTTGCCGGTTTTCTGGCCGGCTACTGCG TCAAATTCATCAGCCGCGCGATCCGTTTGCCCCAGAGCCTCGAAGCGCTCAAGCCGATCCTGATCATCCCGTTGCTGGCGAGCTTGTTCACGGGCCTGGC GATGATTTACCTGGTGGGGCCGCCGGTGGCGAAGATGCTCACCGGCCTCACGGATTTCCTCAGTACCATGGGCACCACCAACGCCGTGCTGCTGGGCATC TTGCTGGGCGGCATGATGTGCGTCGATCTTGGCGGGCCGATCAACAAGGCGGCCTACGCGTTTTCCGTCGGACTGCTGGCGGCCCAGAGCGGCGCGCCGA TGGCCGCGACCATGGCCGCCGGCATGGTGCCGCCGATTGGCATGGGCATCGCCACCTTCCTGGCGCGACGCAAGTTCGCCCAGACCGAGCGCGAAGCCGG CAAGGCGGCGCTGATCCTCGGCATGTGCTTTATCTCTGAAGGCGCGATTCCGTTTGCCGCCAAGGACCCGCTGCGGGTAATCCCGGCCAGCATCGCCGGT GGCGCGCTGACCGGTGCGCTGTCGATGTATTTCGGCTGCAAGCTGATGGCGCCCCATGGCGGGCTGTTTGTGATGCTGATCCCGAATGCGATCAACCATG CGCTGCTGTACCTGTTCGCGATTGTGGCGGGGAGTTTGTTGACGGCGGTGGTGTATGCCTTGATCAAGCGTCCCGAAGTGGTCGAGCTGACGGTCGCGCC GGTGTCATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGTTCATCCCTTCATGCTTAAGTTTCCCTTTTACTGCTCAAGAGGGAACCTGCATGAGCCACTTCAACCTCGGCCGTCGCCGCGTGATGCAAGCCGTC GGCGCCGGCCTGTTGCTACCGGGCCTCGCGCCGGCGGTGATCGCCTCGGTCAAGGACCGCCCGCAGCTCACCGACGGCGTGCAGTCCGGCGACCTGCTGG GCGACCGCGCGATGATCTGGAGCCGCAGCGACCGCCCGGCACGGATGGTGGTGGAGTGGGACACCCGCAGCGTGTTCAGCAACCCGCGCAAATTCGTCTC GCCCCTGGCCGACAGCCGCACCGACTTCACCGCCCGTGTCGAACTCACCGGCCTGCCCGTCGACCAGGCGATTTTCTACCGTGTGCACTTCGAAGACGCC CAGACCGGTGTGGCCAGCGAACCCTGGTTCGGCCACCTGCGCAGCGTGCCGCAACAGCGTCGGGACATCCGCTTCGTGTGGAGCGGCGACACCGTCGGCC
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| Amino Acid Sequence |
>PTS fructose transporter subunit IIBC
MKLAIVTACPNGMVTSVLCARLLDAAAQRQGWSTSVEVVDVQHPERQLSAATIEAAEWVLLVSSTPVDMQRFVGKRVFRSTPAQALQDVDAVLRRGAEEA QVQVAEAAPTKSAPRIVAITACPTGVAHTFMAAEALQQTAKRLGYDLQVETQGSVGARTPLSPEAIRDADVVLLAADIEVATERFAGKKIYRCGTGIALK QSEATLNKALAEGKQESAASGAAAKPEKTGVYKHLLTGVSFMLPMVVAGGLLIALSFVFGIHAFEEKGTLAAALKTVGDQAFMLMVPLLAGYIAYSIADR PGLAPGMIGGLLASTLGAGFIGGIFAGFLAGYCVKFISRAIRLPQSLEALKPILIIPLLASLFTGLAMIYLVGPPVAKMLTGLTDFLSTMGTTNAVLLGI LLGGMMCVDLGGPINKAAYAFSVGLLAAQSGAPMAATMAAGMVPPIGMGIATFLARRKFAQTEREAGKAALILGMCFISEGAIPFAAKDPLRVIPASIAG GALTGALSMYFGCKLMAPHGGLFVMLIPNAINHALLYLFAIVAGSLLTAVVYALIKRPEVVELTVAPVS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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