Pseudomonas sp. PAMC 25886, MUM_RS0122640
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004541, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTTCGTCCTCGCGGCCGGGCAGGGCGGTCAGGCTCTGTCCGGCGCAAGGTCCGGCAACGCACTCACCGCTCTCGATCAAGAACAGCGCACCATGGGTGGC GCACTGGATCAGGCTGGCGCTGGGGTCGAGAAACTGGTGCGGCTGCCATTCCAGCGGTACCCCGCGATGTGGGCAACGGTTGATATAGAAGTAGGCAACG CCTTCACGGCGCACTGCCAACAACTTGCGGCCGTCGATATCGAAGCCGAGGCTCGCGTTGGGGGCGAGTTCGCTGGAGGCGCAGAGAAACTTCATATAGG TCCTTAAGTGCCGCCGTTTGCGGGCTGCAAGGCTGTCCTGGTTTTGCCGGAGAGCCCGGTGCTTGACGTGCAAATGCAAACAATTATCAAATGCCGGCTT CGCCCATAAGCTGACTGGGCGCTCTGTACGATGTCGGGCAGCCTGGATCTGTCACATTGCGAGTGTTTCAGCGGGCCCACCCTTGGAAGGAAACCCTTTT
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| DNA Sequence for Gene |
>MUM_RS0122640
ATGCGCCTGAGTGCCAGTGCTATTGCGCTCGTTGTCGGACTGCTGGTCAGCGCTGGGGCCCAGGCCTCTGAACTGCCACAACGCTGGGTCAGCGCTGGTG GTGCGTTGTCGGAATGGGTGACGGCCCTGGGCGGTGAGTCAAAGTTGGTGGGCGTGGATACCACCAGTCAGCATCCTGAATCCCTCAAGGCGTTGCCGAG CATCGGTTATCAGCGTCAGTTATCGGCGGAAGGCATTCTCAGCCTGCGCCCGCAAATCCTGGTGGGCACCGAGGAAATGGGCCCGCCGCCGGTTCTGGCG CAAATCCGCAATGCCGGTGTGAAAGTGGAGCTGTTTTCGGCCGAGCCGGACCTGCCGACCCTGCAAGGCAACCTTCAGCATTTGGGCAAATTGCTGGGCA GTGAGGCCAAGGCTGCGGAGCTGTTTAGCGACTATCAGCAACAGTTGGATCAACAAAAGACCTGGGTGACCAAGGCCCAGGCGACTCAAAAGGCGCCTGG CGTGCTGTTGTTGCTGGGGCATGCAGGTGGCAAGCCGCTGATTGCGGGTAAAGACACGGCGGCTGACTGGATGCTGCAACAGGCCGGCGGCCATAACCTT GCGACCCACAGTGGTTACAAACCGTTTTCCGTGGAGTCCCTGGCGGGGCTCAATCCTGAAGTGTTGGTGTTTGCCGACCGTGCGCTGACGGGCGATGCGG CCCGCGCGGCGCTGTTCAAGGAGAACCCGATCCTGGCGTCAACGCCGGCGGCCAAGAACGGTCGCGTCTATGAGCTGGACCCCACCTTGCTGGTCGGCGG GCTTGGGCCGCGCCTGCCGCAAAGCCTGGTCAAGCTGTCTGCCGGGTTCTATCCGTCCCAGGCTAAAACCGCCCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCACTCTGGTTAAACCGCGCACCCTGTTTATTGGCTTGAGCCTGTTGTGTGTGCTGGCGATCTGGCTGTCACTGGCCTTGGGGCCGGTCAGCCTGCCGCT GATGGACACACTACGGGCAGCCTTACGCTTGCTGGGTGTGCCGATCGAGGCTCAGGGACTGGAGCAGGCGGAGCTGATTCTCGGGCAGATTCGCCTGCCC CGCACGCTGTTGGGCCTGGCAGTGGGAGGCGTGTTGGCGCTTTCGGGCGTGGCCATGCAGGGGCTGTTTCGCAACCCCTTGGCCGACCCCGGCCTGGTCG GGGTTTCCAGTGGTGCGGCGCTGGGCGCGGCGATTGCGATTGTCGGCGGATCATTCTTTGGAGGTTTGCCGGATGCCTTCGGGCCTTACTTGTTGTCGCT GTGCGCCTTTCTCGGCGGCCTGGGAGTGACGGCGCTGGTCTATCGCCTGGGGCGGCGCAACGGCCAAACCAATGTCGCGACCATGCTGCTGGCCGGTATT
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| Amino Acid Sequence |
>putative hemin transporter substrate-binding protein
MRLSASAIALVVGLLVSAGAQASELPQRWVSAGGALSEWVTALGGESKLVGVDTTSQHPESLKALPSIGYQRQLSAEGILSLRPQILVGTEEMGPPPVLA QIRNAGVKVELFSAEPDLPTLQGNLQHLGKLLGSEAKAAELFSDYQQQLDQQKTWVTKAQATQKAPGVLLLLGHAGGKPLIAGKDTAADWMLQQAGGHNL ATHSGYKPFSVESLAGLNPEVLVFADRALTGDAARAALFKENPILASTPAAKNGRVYELDPTLLVGGLGPRLPQSLVKLSAGFYPSQAKTAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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