Pseudomonas sp. PAMC 25886, MUM_RS0122455 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PAMC 25886 ctg7180000004541, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGACTACGCCATCAAGGCGATCAAGGAAGTGCTGGAAACCGAGATCCCGGTATTCGGCATCTGCCTCGGCCACCAACTGTTGGCCCTGGCCTCCGGCGC CAAGACCCTGAAAATGGGTCACGGCCACCACGGTGCCAACCACCCTGTGCAGGATCTGGACACTGGCGTCGTAATGATCACCAGCCAGAACCACGGTTTT GCGGTGGATGAAGCGACTCTGCCGGGCAACGTCCGGGCGATTCACAAGTCGCTGTTCGACGGTTCCCTGCAAGGCATCGAGCGCACCGACAAGAGCGCGT TCAGCTTCCAGGGCCACCCTGAAGCAAGCCCGGGCCCGAACGACGTAGCGCCGCTGTTCGACCGTTTCATCAATGAGATGGCCAAGCGACGCTAACTGAG CGGCCTGAGGGTGGCCCGGGAAACCGGCGGCCCCCTCAGGCTCTTCAAAGATTGTTCAAGACGGCTTGCCGACTGACCTGCGGATTTGAGTGACAAACCC
DNA Sequence for Gene
>MUM_RS0122455 |carB
ATGCCAAAACGTACAGACATAAAAAGCATCCTGATTCTCGGCGCTGGCCCGATCGTGATCGGCCAGGCCTGCGAATTCGACTACTCCGGCGCCCAGGCCT GCAAAGCCCTGCGCGAAGAGGGCTACCGCGTCATCCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGACATGGCCGACGCCACCTACATCGA GCCGATCAAGTGGCAGACCGTTGCCAAGATCATCGAGAAAGAGCGTCCGGACGCGCTGCTGCCAACCATGGGTGGCCAGACCGCCCTGAACTGCGCACTG GACCTGGAGCGCGAAGGCGTCCTGGAGAAGTTCGGCGTAGAGATGATCGGCGCCAATGCCGACACCATCGACAAGGCTGAAGACCGCTCGCGTTTCGACA AGGCGATGAAATCCATCGGCCTTGACTGCCCGCGCTCGGGTATCGCCCACAGCATGGAAGAGGCCAATGCGGTCCTGGAACGTCTGGGCTTCCCGTGCAT CATCCGTCCGTCCTTCACCATGGGCGGCACCGGCGGCGGTATCGCTTACAACCGTGAAGAGTTCGAAGAAATCTGCGCCCGCGGCCTGGACCTGTCTCCG ACCAAAGAGCTGCTGATCGACGAATCCCTGATCGGCTGGAAAGAATATGAGATGGAGGTTGTCCGCGATAAGAAGGACAACTGCATCATCGTTTGCTCCA TCGAAAACTTTGACCCGATGGGCGTGCACACCGGTGACTCGATCACCGTTGCGCCTGCACAGACCCTGACGGACAAGGAATACCAGATCATGCGTAACGC CTCTTTGGCGGTGCTGCGTGAGATCGGCGTGGAAACCGGTGGCTCCAACGTCCAGTTCGGCATCTGCCCGGACACTGGCCGCATGGTTGTGATCGAGATG AACCCGCGTGTATCGCGTTCTTCGGCGCTGGCATCGAAAGCTACCGGCTTCCCGATTGCGCGCATCGCTGCCAAGCTGGCGATCGGTTACACACTGGACG AGCTGCAGAACGAAATCACTGGCGGCGCAACACCTGCATCCTTCGAGCCGTCGATCGACTACGTCGTCACCAAGCTGCCACGCTTTGCTTTCGAGAAATT CCCGAAAGCCGACGCCCGCCTGACCACGCAGATGAAGTCGGTCGGTGAAGTCATGGCCATCGGCCGGACCTTCCAGGAGTCCTTGCAGAAAGCCCTGCGT GGCCTGGAAGTAGGTGTTTGCGGCCTGGACGAGAAGCTCGACCTGAGCAACCCGGAAAGCATGAGCGTGCTCAAGCGCGAGCTGACCGTGCCGGGTGCCG AGCGTATCTGGTACGTGGCCGATGCTTTCCGCGCCGGCATGACCGTCGAAGACATCTTCGGCATGAACATGATCGACCCGTGGTTCCTGGTGCAGATCGA AGATCTGATCAAGGAAGAAGAGAAGGTCAAGACCCTGGGTCTGTCCTCTATCGATCGCGACCTGATGTTCCGCCTCAAGCGCAAAGGCTTCTCCGACATG CGCCTGGCCAAGCTGCTGGGTGTGACCGAGAAGAACCTGCGCACGCATCGCCACAAGCTGGATATCTTCCCGGTCTACAAGCGCGTTGATACCTGCGCGG CCGAGTTCGCCACCGACACCGCGTATATGTACTCCACCTACGAGGAAGAGTGCGAAGCCGCGCCGTCGGGCCGCGACAAAATCATGATCCTGGGTGGCGG TCCAAACCGTATCGGCCAAGGCATCGAGTTCGATTATTGCTGCGTACACGCCGCTCTCGCCCTGCGCGAAGACGGGTACGAGACCATCATGGTCAACTGC AACCCGGAAACTGTTTCCACCGACTACGACACGTCCGACCGTCTGTACTTCGAGCCGGTAACGCTGGAAGACGTACTGGAAATCTGTCGCGTCGAGAAGC CAAAAGGCGTGATCGTCCAGTACGGCGGCCAAACCCCGTTGAAACTGGCTCGCGCACTCGAAGCTGCTGGCGTGCCGATCATCGGTACCAGCCCTGACGC TATCGACCGTGCCGAAGACCGTGAGCGCTTCCAGCAGATGGTTGAGCGCCTGAACCTGCGTCAGCCGCCAAACGCCACCGTGCGCAGCGAAGACGAAGCG ATCCGCGCAGCCAGCAAGATTGGTTACCCGCTGGTGGTGCGTCCGTCCTACGTATTGGGCGGCCGGGCGATGGAAATCGTCTACGAAGAAGAAGAGCTCA AGCGTTACCTGCGTGACGCGGTGAAAGTGTCCAACGACAGCCCGGTGCTGCTGGACCACTTCCTCAACTGCGCCATCGAGATGGACGTGGATGCGGTCTG CGACGGCACCGACGTCGTGATCGGCGCGATCATGCAGCACATCGAACAGGCTGGCGTTCACTCCGGTGACTCCGCTTGCTCGCTGCCGCCTTACTCGCTG CCGGCGCACATCCAGGACGAGATGCGCGAACAGGTCAAGAAAATGGCCCTGGAACTGGGTGTGGTAGGCCTGATGAACGTACAGTTGGCGCTGCAAGGCG AAGACATCTACGTCATCGAGGTCAACCCGCGCGCTTCGCGTACCGTGCCATTTGTTTCCAAGTGCATCGGTGTTTCCCTGGCGATGATTGCCGCTCGTGT GATGGCCGGTAAGACCCTGAAGGAAATCGGCTTCACCAAGGAAATCATTCCGAACTTCTACAGTGTGAAAGAGGCGGTGTTCCCATTCGCCAAATTCCCT GGCGTGGACCCGATCCTGGGCCCAGAGATGAAGTCCACTGGTGAAGTGATGGGCGTGGGCGATACCTTCGGTGAAGCGTTCGCCAAGGCCCAGATGGGCG CCAGCGAAGTGCTGCCGACCGGCGGTACTGCGTTCATCAGCGTGCGTGATGATGACAAGCCACTGGTTGCAGGCGTGGCCCGTGATCTGATCAACTTGGG CTTCGAAGTCGTGGCTACTGCCGGGACCGCCAAGCTGATCGAGGCTGCCGGCCTGAAAGTACGTCGCGTGAACAAGGTGACGGAAGGCCGTCCGCACGTG GTCGACATGATCAAGAATGACGAAGTCACCCTGATCATCAACACCACCGAAGGTCGCCAGTCGATCGCGGACTCCTACTCCATTCGTCGTAACGCCTTGC AGCACAAGATCTACTGCACCACCACCATTGCTGCTGGCGAAGCTATCTGCGAAGCGCTCAAGTTCGGTCCTGAAAAAACCGTACGCCGCTTGCAGGATCT ACACGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAAATACCCAATGACCGTCCAGGGCGCAAAAGCCCTGGAAGAAGAGCACGCCCACCTGACCAAGGTCGTCCGTCCGAAGCTGAGCCAGGACATCGGTAC GGCCCGGGAATTGGGTGACCTGAAGGAAAACGCCGAATACCATGCTGCCCGCGAGCAGCAAGGTATGGTCGAGGCGCGGATCCGTGATATCGAAGGCCGC CTGCAGAACTCGGTGGTTATCGACGTCACCACCATCCCGAAGACTGGCAAGGTGATTTTCGGCACCACCGTGGAAATCGCCAACGTCGAGACTGACGAAA GCGTGGTTTACCACATCGTGGGTGAGGACGAGGCCGACTTCAAACTCGGCAAGATCTCTGTCGGTTCGCCGCTGGCCCGCGCCTTGATTGCCAAGGAAGA GGGCGATGTGGTGGCCGTCAAGACGCCTGGTGGCGTGATCGAGTACGAGATTGTCGAAGTTCGTCACATCTGAAAGACGGCGCCCGCTTCATGCGGGCGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLDCPRSGIAHSMEEANAVLERLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM NPRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGATPASFEPSIDYVVTKLPRFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDEKLDLSNPESMSVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKEEEKVKTLGLSSIDRDLMFRLKRKGFSDM RLAKLLGVTEKNLRTHRHKLDIFPVYKRVDTCAAEFATDTAYMYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA IRAASKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site