Pseudomonas sp. PAMC 25886, MUM_RS0121930
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004538, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGGCCGGTGGCACAGCGGCAAACAAGCCCATCAGGCTGACAAGGCCAAAAAACGACCAGCGCATGGCGAATTCTCCGAGGTTCACATCGTGGATAGGT GCAGCTTGGCCGAGGGCGCGAATGAATGCCAGCCCGGCCGATGTTTTCAGAACTTGACCTTGCCATCGTGGCAAGGTCAACACTGCGGGCAACCTCATCA AAGGAGTCATGTCATGCAAGTATTCAGCGTTGAAGGAATGACCTGCGGCCACTGCGTTCGCTCGGTCACCCAGGCGGTGCAGGATAAGGATCCGTCGGCC AGCGTGCGCGTCGACCTCGCGGCAAAGGAAGTTGGCGTGGAAAGCAGCCTGCTGTCCCCGGCGGAAGTGATCAACCTGATCAGCGAAGAAGGCTACAGCG TCAAACTCGCCTGACTTTCTGATAGTTAGCGAGCTAACTTAATGTTCAAGGCACCCGAGCCCGGCTAGACTGTTGGGCTGCCGACTCACCTGGGTGCCTG
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| DNA Sequence for Gene |
>MUM_RS0121930
ATGAACCTTCGTATAATCCTGATTTTGGGGGCCTTGAGCGCGTTCGCGCCGTTGGCCATCGACTTCTACCTGCCGGGTTTCCCGGCCATGGCCGTGGCAT TCGGCACCGACGAAAAACATATTCAGCTGACCTTGGCCGTGTACTTCACGGGCCTGGCGATCGGCCAGTTGATCTATGGGCCGCTGGCGGACCGTTTTGG CCGGCGTGGGCCGCTGCTCAGCGGCGTCACCCTGTTTACCCTGGCGTCGTTCGCCTGTGCATACGCGCCTTCGCTGGAATGGCTGATCGGCGCGCGCTTC GTCCAGGCCCTGGGCGGTTGTGCGGGCATGGTGATCTCCCGCGCAGTGGTGAGTGACAAATGCGACGCGGTGGGCTCGGCCAAGGTGTTTTCCCAACTGA TGCTGGTCACCGGGCTGGCGCCGATCCTTGCGCCGCTGGCGGGTGGGGTGATGGTCGGTGTGTGGGGCTGGCAGTCGATCTTCATCGCGCTGACGGCGTT CAGTGTGATGGCGGCCCTCGCGGTGGCAGTCGGATTGCCGGAAAGTTTTCCCGCCCATCAACCGCGTCAGCCTCTGTCGGGTGCCCTGCGCCAGTATGGC CGGTTGCTCTCGGACCGGGTGTACCTGGGCTACGCCTTGACCGGTGGCATCTCGATTGCCGGCATGTTTGCCTACATCGCGGGTTCGCCTTTCGTCTTTA TCAAACTCTATGGCGTGCCTGCCGAGCACTATGGCTGGGTCTTTGGCTCCAACGCCGCCGGCTTTATCCTGGTTGCACAGGTGAATGCGCGCTTGCTGGC CTCGCGCGGCCCGGCGTTCCTGTTGTCGCGCACGGTGTGGGTGTACCTGGCGGCGGGTCTGTCGTTGCTGGCCATTACAGCTTTGCGCACTGAGGCGTTG TGGCCACTGCTGGTGCCGCTGTTCATCTGCATCGCCAGCCTGGGCTGCATTTTGCCCAACACCTCGGCTTGCGCCATGAGCGGGCAGGGCGCACGGGCGG GCAGCGCATCGGCGTTGCTCGGTTGCATTCAGTTTGGTGTGGCCGCCGGCGCGGCATCGTTGGTCGGGGTGTTGCACGACGGCACGGCGATGCCGATGGC AATGGTCATAAGCTTGTGTGGCGTATTGGCCGTGACGTTCGCGATGCTGACCCGACGCCTGCAGCGCCAACGGGCACTGCAAGCAGCGGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAGGTCAGCCAGCAGAACGCTGCTGGCTTTCGGGGAATCGGTGAGGTGCCTGGATACGGGTTTGCAGGGTGTCGGCAAACGCGCGGGCTTCGGCCTCAC TGCGGAAGGTGAAGGCGTTCTGGTCGAGACGAACCTGCCATTTGTTGCCGTGGGATTTTGCTAACGCTTTTATCAGGATCTTCATTGCTGACTTCCTCGC GTAAAAGAATCGTGGCAAAGGCGGCCAATATAAACCTGAATGCGTCCACAAATGTGACAAGGATCAAGTCTCTGACTAGCGGTGTCGTCCATTACTCAGG TGCATAACAGACGACACTGACAGAACGTTTGGTTAGAACCCTTCCAGCACAATTTTGCCCTTGGCCTTGCCGCTTTCCAGCAGTTCGTGGGCACGGCGCA GGTTGGCCGCGTTGATCACGCCAAAGTGCTCGCCCACCGTGGTTTTCAGGGTACCGGCATCGATCAGTTCGGCCACGCGGTTGAGCAGGTTGTGTTGCTC
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| Amino Acid Sequence |
>major facilitator transporter
MNLRIILILGALSAFAPLAIDFYLPGFPAMAVAFGTDEKHIQLTLAVYFTGLAIGQLIYGPLADRFGRRGPLLSGVTLFTLASFACAYAPSLEWLIGARF VQALGGCAGMVISRAVVSDKCDAVGSAKVFSQLMLVTGLAPILAPLAGGVMVGVWGWQSIFIALTAFSVMAALAVAVGLPESFPAHQPRQPLSGALRQYG RLLSDRVYLGYALTGGISIAGMFAYIAGSPFVFIKLYGVPAEHYGWVFGSNAAGFILVAQVNARLLASRGPAFLLSRTVWVYLAAGLSLLAITALRTEAL WPLLVPLFICIASLGCILPNTSACAMSGQGARAGSASALLGCIQFGVAAGAASLVGVLHDGTAMPMAMVISLCGVLAVTFAMLTRRLQRQRALQAAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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