Pseudomonas sp. PAMC 25886, MUM_RS0121590

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PAMC 25886 ctg7180000004538, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCGGCCTGCGGGTGGATGAAGTGGTCGCCATGGGCCGCACACCTCACAAGGGCCTGTTCGACAGCGACACGGTTGAAGACCGCAACCTGATCCGCCAGG CCCTGGATAACGTCGGCCTGCTGGGCTTTGAAGACCACGCCTTCGCCACCCTCTCGGGCGGTGAAAAGCAGCGGGTGATCCTCGCCCGCGCCCTGGCCCA GCAACCGCAACTGCTGATCCTCGACGAACCGACCAACCACCTCGACCCGCGCTACCAGCTGCAACTGCTGCAACTGGTCAAGCGCCTGAACATCGGCACC CTCGCCAGCATCCACGACCTGAACCTGGCCGCCGCGTTCTGTGATCGCCTGTACGTGATCAACCACGGGCGCATCGTCGCCAGCGGCACGCCTCACGCAG TGCTGACCGCCGAACTGCTGCGCGAGGTGTTCGGCGTTGAAGCATTGATCGACACCCACCCCTTGTCCGGCTACCCCCGAATTACCTGGATAACCCAACC
DNA Sequence for Gene
>MUM_RS0121590
ATGATCCTGCGCTCCCTGCTGTCTCTCGCTTTGCTGCTCGGCACTTCCCAGGCGTTCGCCGAAGCGACCCGTTACCCGCTGAAAATCCAGAGTTGCAACC GCGAAGTGAGCTTCGCCGAGGCGCCGAAACACGCGGTCAGCCACGACATCAACATGACCCAGATGATGCTCGCCCTGGGCCTCAAGTCGCACATGGCCGG CTACAGCGGGGTCACCGGCTGGAAGTCGGTGACCCCGGAAATGGCGCAGATCCTCGACGGGCTGCCGGAACTGGCGAGCAAATACCCGTCGGTGGAAACC CTGCTGAATGCCAACGTCGACTTCTTCTTCGCCGGCTGGGACTACGGCATGCGCGTCGGTGGCGACCTCACCCCGCAAACCCTGCAGCCGCTGGGCATCA ACGTCTATGAGCTGACCGAGTCCTGCGCCTTCGTGATGAAGCGCCCGGCCGCCACCCTGGAAGACACCTACAACGACCTGCGCAACCTGGGCAAGATCTT CGACGTACAGGACCGCGCCAACGCACTGATCGCGCAGATGCAGGCGCAGGTCGCCGACGTGCAGAAAACCCTGCCTGCCGAAAAGCCTCGGGTATTCCTC TACGACAGCGGTGAAGACCGCGCCATGACCTCCGGCCGCCTGGGCATGCCCCAGGCGCTGATCGACGCCGCCGGTGGGCGCAACATTCTCGACGACGTGG ACGCCAGCTGGACCCGCGTCAACTGGGAAACCGTGGTGGAGCGCAACCCGCAGGTCATCGTGATCGTCGACTACAGCGAAATCACCGCAGACCAAAAAGA GCAGTTCCTGCTGAACAACCCGGCCCTGCAATCGGTGGACGCGATCAAGAACCAGCGCTTTATCGTGATTCCCTACGTGCAGGCCACGCCGGGCATCGAC AACGTGCTGGCGGTTGAAACCCTGGCCAAGGGGTTCCACGGCGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCACCCGTCGCTACGCCCTGCTGCTGAGTGCCCTTGGCGCGTTGTTGCTGATCTCGTGCGTGGTCTCGCTGGGGTTCGGCTCGGCGCGGGTGCCGGTGGA CGTGGTGTGGCGAATTTTGCTGCACAAAGCCTTCGGCCTTGGCGAGGTGGACTGGAGCGCAGGGCAGGAACACATCGTGTGGCTGATCCGCGTGCCGCGC ATGTTGCTCGGGGCGTTGGTGGGCGCCGGGCTGGCGTTGATTGGTGCGGTGTTGCAGGCCGTCACACGCAACCCGCTGGCGGACCCGCACCTGCTGGGCG TGACCTCCGGCGCCACCCTGGGCGCGGTGATTGTGGTGCTGCATGTGGGCGAAGTGATCGGTTTGCTCACCCTGCCTATCGCGGCGTTTATCGGTGCCTT GTTGAGCATGATCGTGGTGCTGGCGGTGGCCAGTCGCAACGGTCGGCTGGAGAGCGACCGGTTGCTGCTGTGCGGTGTGGCGGTGTCGTTCGTGATGATG
Amino Acid Sequence
>iron ABC transporter substrate-binding protein
MILRSLLSLALLLGTSQAFAEATRYPLKIQSCNREVSFAEAPKHAVSHDINMTQMMLALGLKSHMAGYSGVTGWKSVTPEMAQILDGLPELASKYPSVET LLNANVDFFFAGWDYGMRVGGDLTPQTLQPLGINVYELTESCAFVMKRPAATLEDTYNDLRNLGKIFDVQDRANALIAQMQAQVADVQKTLPAEKPRVFL YDSGEDRAMTSGRLGMPQALIDAAGGRNILDDVDASWTRVNWETVVERNPQVIVIVDYSEITADQKEQFLLNNPALQSVDAIKNQRFIVIPYVQATPGID NVLAVETLAKGFHGE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site