Pseudomonas sp. PAMC 25886, MUM_RS0119930
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004533, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCGTTGCCTGCAATGGCTCAACCGGCGGCTGGGCGAGGAGTTAACCTTGGCCGGCCAGGGCGCCGACTGCATCATGGGCAGCACGGTAGTGGCGTTGC TGCTTCAGGGCGACCGCGCCGCGTGTGTCTGGGCGGGTGACAGCCGTTGCTACCTGTGGCGCGGGCAGACGTTGTACCAGCTGTCGCGGGATCATTCGCT CTTCGAGCAGTTGGTTGATCAGCGAGTGAGCCTGGAACAGGCCAGGGCTCATCCTGATGGACGGGCCTTGACCCGGGCCATCGGCTCGCGGGCTCCTCTG AATCCGCAGGTATTGGAACTCGGGACCATGGCGGGGGATGTTTTTCTGCTGTGCAGTGATGGCCTGTACCAGGCGCTTAGCCATTACGAGTTGGGCCAGG CATTGAGCCTGGGAAGCCCGCAGCAGGCGCTGGACCAACTGTTCGCCGGTGTATTACGGGGGGCCGCCGCTGACAACCTGACCGCTGTGGTGGTGCAGTC
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| DNA Sequence for Gene |
>MUM_RS0119930
GTGAGCGACGTGACCCACTTTGCCTTTGCCGAGGCACAGGCAACCCCGCCGCGTGACGGCACACCCGAATTGCTGGCCGGGCGCTACCTTATCGAACGTG TGTTGGGGGCAGGCGGCATGGGGGTGGTCTATCGCGCACGGGACCTGCTGCACGAACAGTTTGGCGAGCCGCGCTCCCGTGTGGCGATCAAGGTGCTGGG TGAAGCCATCCGCGAGTCTGCAGATGCCCATGTGCTGCTTTACAGCGAGTTCGCCCTGACCCGTAGCCTGCGGCATGAGCAAGTGGTGCGTGTGTTTTCG TTTGAAGTGGACGCTCCCTGCCAGATCGCCTTCTTCACCATGGAGTTGCTACAGGGCATGACCCTGGATCGGTTGCTGCTGGAGTGTCCTGGTGGCTTGC CCTGGCGAGAGCTGCAAAGCATCGCCGTGCAGTTACTGGATGCGCTGCGCCATAGCCATCAGCACGGCGTACTGCACGGGGATGTGAAGCCCGGCAATAT CATGGTGGGCGATGGCGGCTTGCGTTTGTTTGATTTCGGCCTGGGCCAGGCTTGCGGGCAGGCTTCAACGGGGTCGCCCGGCTTGAGTCGCAGTCGTTTC AACGCTTGGACGCCCGCATACGCCGCGCCGGAGTTGCTGGCCGGAGGAGCGTTGTCGGCCAGTGCCGACCTGTATGCCGCGGCGTGTGTGCTGTATGAGT TGGCACACGGCCGACGCCAGCCCGCTGAACGTCCGCCCCGGCCCCGGCAATTACCCCGCCGTTGCTGGCCGGCATTACGCACGGCGTTGGCGGTCGACCC CGAACGCCGGGCCATCACCCTTGATGAGTTACACGAGGTGCTCGGCGATACCCGCCAGGGACTGGGCCGCTGGTTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGGCAGGTCATGCAGTTGGCAATATTCCGTCCAACTCAGGCCTGCCATTTGCGCCACTTCCTTGTGCACCTCAAGGCGCTGGGCCTCGAACTCCGCAG GGGAGTGCGCCGTCAGTTTCAGCGTCAGCTCCCAGGCAAACAAGCCTTGCTGCTCGGCTTCAGCCTCAAACGCTTCATGCAGGCGCTCGGCGCGGTACTG CTCGATGGTTTCCCCCTTGGCCTGGGCCGCCAGGGGGTTCAACGTATTCAGTTCTGCGGCCAGGGCCGGGTGCTCGTTCAGGAATCGGTCCAGGGCTAGC TGGTGGTTTTCGCCGGGTTGGGACAAAGGTTTACTCCAGGATAAGAGAGGTCAGTCTGGTTGGGTCATCAAAAAAGCCGCCATGGCCGCATAGGCCGGCA AGGTCACCCCGTCATTGGCCGCATTGCCCGCCACAGGATGTGATGCATAGCGAACAATCACCATTTCAGCCTTGGGGTCAATGTAGATGCTCTGGCCATG
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| Amino Acid Sequence |
>serine/threonine protein kinase
MSDVTHFAFAEAQATPPRDGTPELLAGRYLIERVLGAGGMGVVYRARDLLHEQFGEPRSRVAIKVLGEAIRESADAHVLLYSEFALTRSLRHEQVVRVFS FEVDAPCQIAFFTMELLQGMTLDRLLLECPGGLPWRELQSIAVQLLDALRHSHQHGVLHGDVKPGNIMVGDGGLRLFDFGLGQACGQASTGSPGLSRSRF NAWTPAYAAPELLAGGALSASADLYAAACVLYELAHGRRQPAERPPRPRQLPRRCWPALRTALAVDPERRAITLDELHEVLGDTRQGLGRWF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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