Pseudomonas sp. PAMC 25886, MUM_RS0119050
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004529, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCTTCCTGACAGCGCTGTTTAGGGTCAGCGCCAAGAATAAGGAACGCCGTCGTGAAGACACTTAATCCAGGCTCATTGAGCCTTCTGCTGATCAGCTGC GTATTGAGTACCAGCGTGAGCCTTCCAGTGCTCGCGGCAGGCGACGGTGTGATCGTGATTCAGCGCACCGTCCAGGGCCACATGGCGGGCCGCACTGCCG GCGTCGATCCCAACCCCGTCACCGTCAATGCCAATGCGGCGCCACAGATCCTGCGTGCCACCAATGAGCTGAGCGATAACGACTACGCGAACATCAGCAG CGGCTCCAGTATCACTCGCGCCATTTTGCCTGGCGGCAACCTTCCCGGCTTGACCAACAACGGCGGCGGCGTGGGCCTCGGTGCAGGCGCAGCAGCCGGC CATGGTAGCGGCTCCAGCCTCTCCGGCCAGATCAACGGCTCAATCTCCCGCGGCATGGCTCCCTTGAACAACATCGGCGCCATGATGGGAGGCCAGTGAG
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| DNA Sequence for Gene |
>MUM_RS0119050
ATGAACCATTCCTGGTTGTTCCTCGCGATCCTGGCCAGCTCAGCAGCCATGGCTGACAACAGCGCAGTGATCGACAACTCCGGCACCCAATACAACGGAA TTATCTCGATCAACCAGGCAGCCGGTGATCAGCAGCAGCAAATCAACAGCCGCGCGATTTCAGCCGGCACCAACACCCAGGCTGGCGGCTCCATCAGCCA GACCATCGGCGGCGCACCTGCCGACCGCTCCCAGAACGCCAAGGTGGCGATCCAGGGCAACTCTTTCAGCAATGGCAACGGTGTACTGGGCGTCAACCAG TCGGCCGGGGCCACCAACCAGATGATCAATGCGGTGCGGATCAGCGTGAATGCTGGCCCGCAAAGCATCGACGACAGCGTCATGTCGCAACAGAACGTGG CGCTGTCACCAAACTCAGGGTTCACCTCTACCACTGGCAGCCGCCAGGTCGTCACAAGCGACCAGGCCTTCACCGGCAGCCGTGGAGTGGTACAGGTGAA TCAGAGTGCCGGGGTGGGGAACCGCATGGCTAACGCCCTGAATGTGCAAATCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCATTGGAGCTAGAAGCTGGACCGTACCAACACTTAACCAACTAATTAGAAGCAAGGGGAAATACCATGAAAACTACAATGGCTCTTAAACCACTGGCG TTCGCTCTCGCTGCAATCATGGCTGCCGCCGCACATGCCAACCCACCTACTGCCGTGGTAGCCGCCGTTTCCGACGCGCAATCGAGCAACCACAATGGCG TGCTCAACCTGGGCACCCAGAACAACGCATCGGCCAACAACTCGTTGAACGGCAGCAGCGGCAACGCCCAGGCCAACATCGCAGCCGGTGATGGCAACCA ACAAGACAACCAGACCGCCATCGCGGCCGGTGACGCAGATGCCGTGTTTGCCCTGGGTACCATTACCCAAGACAACCACAACAACATCTCGGTGCAAGTG GCTACCCACAACAACGCTTCGCTCAACAACTCGGCCAACGGCAGCTCCGGCAACCTGGGCGTGAACGCGACCGCAGGCAACTTCAACCAACAGAAAAACC
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| Amino Acid Sequence |
>hypothetical protein
MNHSWLFLAILASSAAMADNSAVIDNSGTQYNGIISINQAAGDQQQQINSRAISAGTNTQAGGSISQTIGGAPADRSQNAKVAIQGNSFSNGNGVLGVNQ SAGATNQMINAVRISVNAGPQSIDDSVMSQQNVALSPNSGFTSTTGSRQVVTSDQAFTGSRGVVQVNQSAGVGNRMANALNVQIQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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