Pseudomonas sp. PAMC 25886, MUM_RS0111975
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004512, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACCCCGCCGCTCTGGCTGGATGACCTGCAAGCCGCCGGCATTCCCCATGAGTGGAGCACCGACATCCTCACCCGCTTGTGGCGCAAACTGGCCCTGAAC TGTGCGATCAACCCGCTGACCGTGCTGTACGAATGCCGCAATGGCGAGCTGCAAGCCCATCAGTGCGAAGTCGCCACCCTGTGCGCCGAACTCGCCGACC TGCTAGAATGCTGCGGACAACCCGCCGCCGCGCAGGATTTGCAAAGCGAAGTGGAACGCGTGATCCAGGCCACCGCGGCCAACTACTCGTCGATGTACCA GGACGTGATCAGTGCCCGGCGCACCGAAATCAGCTACTTGCTCGGCTACGCCTGCCAGGCGGCGGCTCGCCATCAACTGACCTTGCCGCACCTGCAACAA CTCCAGGTGCGATTGGTACAGCGACTGTCTGCACGCGGATTGCCCAGCGACTGAGGCACGCGCTACCCTGCCTGCTTGTTCCTTTGCAGCGAAAACCTCG
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| DNA Sequence for Gene |
>MUM_RS0111975
ATGCCACTGCGCCAGCGTCTCGAAAATCTACCGGTTGGGCAGAAACTGCTGGCGGCCCTGCTGGTTTTGTTGACCACCGTGTTGCTGGTGGCCAACCTGA CCTTTATCAGCGCCGCCTACTGGATCTCCCAGGAAAGCATGGCCCCCCAGGCCTTGCAGGCCATCGGTCGGCTGGTGTCCAACCCGTCGCTCGCGGCCGA GGCGCTGGACTCACCGCTCAAGGCGCAAACCCTGCTGGATGAACTGACCAGCTACTCGCCATTACGGGCCGCCGCCCTATATGACGGCGAAGGCACCCGC CTGGCCCAGTTGCAACACGCCAATCGCCTGCACCTGCCCGACAATTACCGCGAGATTGAAATCTGGCGCGCCACCGAGTTTCGCAGCAATCAAGTGATCA CCATTCCCCGTGCCGGCCAACCGTCCGGGCATTTACTGCTGGTGGCCAGCAGCGAACTGCCGGTGGCCTTCTACACCGGGACGTTCACCGCCAGCCTGGG CATCCTGATTTTCAGTGTGCTGCTGTGGCTGGTGATCGCCCGGCAGATCAAGCGCCTGATTACCCGCCCGATCCATGAATTGGAAGAGTTGTCGCGCCAG GTCACCCGGGAAGAGAACTACGCCCTGCGCGCCGGTCGCGGCAACCACGACGAAATCGGCAGCCTCGCCGAAGCCTTCAACACCATGCTTTCGCGCATCG AAGCCCGCGAGCAGCAACTCAAGCGCGCGCGGGACGATTCCCAGGCCGCCTACGATCAAGCCCAGGGCCTGGCGGAAGAAACCCGCCATACCAACCGCAA GCTGGAGCTGGAAGTCCAGGTGCGCAGCAAGATCGAGAAAAAACTCACCGGGTTCCAGAATTACCTCAACAGCATCATCGACTCGATGCCCTCGGCGCTG ATCGCCCTCGACGAACAGCTCTACGTCACCCAATGGAACCAGGAGGCCAGCGCACTTTCCGGCACCCGTCTGGATGAGGCGCTGAACCAGCCGATCTTCC TCGCCTTCCAGCCGCTCAAGCCCTTCCTGCCGCAGATCAAGGCCACGGTGGAGCAACACACTGTGGAGCGGATCGAGCGGGTAACCTGGGTCAAGGATGA CGAGCCCAAGCACTACGCCCTGACGTTCTACCCGCTGATGGGCGGTGCCGGGCGCGGTGTGGTAATCCGGATCGACGACATCACCCAGCGCCTGTCCCTG GAAGAAATGATGGTGCAGTCGGAGAAGATGCTCTCGGTCGGCGGCCTGGCCGCCGGCATGGCCCACGAAATCAACAACCCGCTGGGGGCGATCCTGCATA ACGTGCAGAACATCCGCCGCCGGCTGTCGCCGGAGCTGCCAAAAAACCTCGAGCATGCCGAACAGGTGGGCATCGAGCTGGAAACAGTGAACCGCTACCT GCAAAGCCGCGAAGTGCCGCAGTTGCTCGACGGCATCCAGCAAGCCGGCGCCCGGGCGGCGAAAATTGTCACCCACATGCTCAGCTTCAGCCGCCGCAGC AATCGCCAGATGGCGCCCTGCGATCTACCGGCGCTGATTGACCAGGCGGTGGAAATTGCCGGCAACGATTTCGACCTCACCGTCGGCTTCGACTTCAAGG GCCAGGCGATCATCCGCCAGTTCGACACGCAGTTGGGCCCGGTGCCCGGCACCGCCAACGAACTGGAACAGGTACTGCTCAACCTGCTGAAAAACGCCGC CCAGGCGATTCATCAGCGCGAAGATGACAGCGAGCCAGGGCGCATCATCCTGCGTACACGGCTGAACCCGCCGTGGGCGGAAATCCAGGTGGAGGACAAC GGCATCGGCATGAGCGAGAACGTGCGCAAGCGCACCTTCGAACCGTTCTTCACCACCAAGGAGATCGGCCAGGGCACCGGGCTCGGCTTGTCGGTCTCGT ATTTCATCATCACCAACAACCACAAGGGGCAGATGGAAGTCCATTCCACCCTCGGCCAGGGCACCTGCTTCACCTTGCGCCTGCCCCTGGCCGGCAGCCA ATTGCCACCCAACGAACTCACTCAACTGGAGCGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCATGGGCTTTCGCCTGTCGAAAATTTACACCCGTACCGGTGACAAGGGCGAAACCGGCCTGGGCGACGGCCGCCGCGTACCCAAGGACCATCCACGGGT GGAGGCGATTGGCGAAGTGGATGCGCTGAACAGCCAGCTGGGTCTGTTGTTGGCAGGCCTGGAGGAACAGAGCGGGCAACACCCGGCGCTGAAGGATGTG ATCGAGGTGCTTACGCCCTGCCAGCATCGACTGTTCGACCTGGGCGGTGAGTTGGCCATGCCGGTGTACAAATCGCTGAATGCCGCGGAAGTCGACCGTT TGGAAGCGGCGATTGATCGCTGGAATGAAGAGGTCGGGCCGCTGGAGAACTTCATTTTGCCGGGTGGTTCGGCGCTGATTGCCCAGGCTCATGTGTGCCG TAGCCTGGCCCGCAGCGCGGAGCGGCGGTGTCAGCACCTGAATGCGGTGGAACCGTTGGAAGGCGTAGGGTTGGCGTATATCAACCGGCTGTCGGACTTG
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| Amino Acid Sequence |
>sensor histidine kinase
MPLRQRLENLPVGQKLLAALLVLLTTVLLVANLTFISAAYWISQESMAPQALQAIGRLVSNPSLAAEALDSPLKAQTLLDELTSYSPLRAAALYDGEGTR LAQLQHANRLHLPDNYREIEIWRATEFRSNQVITIPRAGQPSGHLLLVASSELPVAFYTGTFTASLGILIFSVLLWLVIARQIKRLITRPIHELEELSRQ VTREENYALRAGRGNHDEIGSLAEAFNTMLSRIEAREQQLKRARDDSQAAYDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNQEASALSGTRLDEALNQPIFLAFQPLKPFLPQIKATVEQHTVERIERVTWVKDDEPKHYALTFYPLMGGAGRGVVIRIDDITQRLSL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPELPKNLEHAEQVGIELETVNRYLQSREVPQLLDGIQQAGARAAKIVTHMLSFSRRS NRQMAPCDLPALIDQAVEIAGNDFDLTVGFDFKGQAIIRQFDTQLGPVPGTANELEQVLLNLLKNAAQAIHQREDDSEPGRIILRTRLNPPWAEIQVEDN GIGMSENVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVHSTLGQGTCFTLRLPLAGSQLPPNELTQLER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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