Pseudomonas sp. PAMC 25886, MUM_RS0111035
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004510, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGGGATGTTCGGCTGGGCAATCACCATGAACGGGCAATGGCCCTGGCTTGGGGATGCCAGGCTGGTGGCGAACGCCTGGCCGGCCGGGCCGTTGCGCG GGCCGATGAGGATGTTGATGTGGGCAGCATTGACGCCTGGGCCTTCGAAGCCTTCGCCGATGTACAGATCAAGTGCTTTCATTTCGCAAACGCTCTTTTT TGTTATGGGGAGCTGGTTGGCGAATTTTTAGCACTGGCGCAGGCGGCGGCCGTAACCATTAAAAGTCATGGGGGTGTGAGTTTTGGTCATGGCCCTGCGA CCATCAGACCCTTCCTACGCGTTGACCATCGTTAACACACACCATATAGTGTGCCCACAAACACAGACAACCACTACATAGTGTGCAGGAACGCAGTATC TCGACCACACTATGCGCAGTATTTCAATGCCTTGAAGCCTGCAAAACGCACATTTTTGAACGCGGTCACGCCGTCAAACGGACCAGGAAGGAGCAATTCA
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| DNA Sequence for Gene |
>MUM_RS0111035
ATGCTGAGTTGGGATGAAGCAGATCAACCAGACACCGGTGACGTAGTCATTCGAGGCGCCAACGCCGGCCACGCCACCGAAGCCAACATGGACCGCCTCG ACGGCGCCGGCGCTGCCGCCGCCCTTGAAGCCCGCAACGTGACCGCCAGCGACTCCGCCGCGATCATCCGCGCCAAGGCCGCCCTCGACAAACTCGACGT CGCCGAAGGCCTCGCTGAGCTCGAAGGCTCCGCCGCCCGTGTCGCCGTTGACGAAAAGCGCATGATCAACTGCCGCGCCGACCTCAACCAACTCGTGCCG TTCAAGTACGACTGGGCCTGGCAGAAATACCTCGACGGCTGCGCCAACCACTGGATGCCGCAAGAGGTCAACATGACCGCCGACATCGCCCTGTGGAAAA ACCCCGAAGGCCTGACCGACGACGAACGCCGCATCGTGATGCGCAACCTCGGCTTCTTCTCCACTGCGGATTCGTTGGTCGCGAACAACCTGGTCCTGGC CGTGTACCGCCTGATCACCAACCCGGAGTGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAAGCGATCCACACCCACGCCTACCAGTACTGCATCGAA TCGTTGGCCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATTCCGTCGGTCGCCAAAAAGGCCGCCTGGGGCTTGAAGTACACCCGCTCGATCT CCGATCCGAAGTTCGAAACCGGCACCGTCGAGACCGACAAAGAGCTGCTGCGTAACCTGGTCGCCTACTACTGCGTCCTGGAAGGCATCTTCTTCTACTG CGGCTTCACCCAGATTCTGTCCATGGGCCGTCGCAACAAAATGACCGGCGTGGCCGAGCAGTTCCAGTACATCCTGCGCGATGAGTCGATGCACCTGAAC TTCGGTATCGATGTGATCAACCAGATCAAAATCGAAAACCCGCATCTGTGGGATGCTGAAATGAAGGAAGAAGCGACCCAGATGATCTTGCAAGGGACTC AGCTGGAGATTGAATATGCTCGCGATACCATGCCACGCGGTGTACTCGGCATGAATGCGGCGATGATGGAGGACTACCTCAAGTTCATCGCGAACCGTCG TTTGTCGCAGATTGGGTTGAAGGAAGAGTATCCAGGGACGACGAATCCGTTCCCGTGGATGAGCGAGATCATGGACTTGAAGAAAGAGAAGAACTTCTTC GAGACCCGTGTGATCGAGTACCAGACTGGTGGTGCGCTGAGCTGGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCCTAAGCTAACTAAAAAGCCCTGACTTGATCAGGGCTTTTTTGTATTTGCAGAAGGCCAAATCCGACAGGCAGGTAGGAAATTTCGTGGACGCGTTAG TGGCCACTCAGTATCGTCCGAAGGTTTTCTACCTTTGGCGACTGCATGGATATCACAAAAGATAAAACGGACTGGGACGACGCGGAGTTAGCCGCAGCGG TAGAGGCTTACTTGAAAATGTTGGCCTGGGAAAAAAGCGGCCAACGTTTTAACAAAGCCTATGAGAACCGCTTGCTACGTCAGGGACCAATCGCAGGCCG CACAGAAGGCTCTATCGAATTTCGTATGCAGAATATTTCTGCGGTTCTGGTCCAAATGGGCCTGGACCGGATCAAGGGATACAAACCTGCAAAGAACGTG GGCTCGGGAGTAGAACAACAGATTCGCAAAGTTCTCACCGCGCTTCGTATATTTGAATCAGATGAAACAGCCCAAACTGCAGATGAGCAAACCCTCGTCC
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEADQPDTGDVVIRGANAGHATEANMDRLDGAGAAAALEARNVTASDSAAIIRAKAALDKLDVAEGLAELEGSAARVAVDEKRMINCRADLNQLVP FKYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIE SLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKELLRNLVAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLN FGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF ETRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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