Pseudomonas sp. PAMC 25886, MUM_RS0110490
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004508, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCACGAAACGCAACCGCACGCCCGGCGCTTCCCGGGCAATACGTGCGAGCAACGCCGGGCCGAAGTTTTCAACAAAACCGTCGCTGGTGCGCAAGGTGA AGGTGCGCACCAGTTGGCTCAGGTCCAGCTTCGCCGCCGGTCGCAACACGGCTTCTGCGTCCTGCACCAACTGGCTGACCTGCTCGCGCAGCTCCAAGGC GCGCGGCGTTGGCACCAGGCCACGGCCAGCGCGCACCAATAACGGATCCCCCGTGGTTGCCCGCAGTCGTGCCAGGGCCCGGCTCATTGCCGAAGGGCTC AGGCGCAGGCGTTGGGCGGCGCGGGCGACGCTGCCTTCAGCGAGCAACACATCCAGGGTGACCAGCAAATTCAAATCAGGTGTCGACACGGCAAACCTCA TAGGGCGTTTGGCACACGTATACAGTGCAAATGCTGCGCCTTCCGCCATGTTAGGTGACGGCGTAGATTTCTGACAGCGGTCAAATTCAGGAGCCTCTTG
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| DNA Sequence for Gene |
>MUM_RS0110490
ATGAAATCACCTACACCCCGTGGCACCCTCGTCGCCCTGTCACTGTCCATGCTGCTGGCGTCGTTGGGCACCAGCATCGCCAATGTCGGCTTGCCGAGCC TGGTGCAGGCGTTTGATGCCTCCTTCCAGACGGTGCAGTGGGTGGTGCTCGCGTATTTGCTGGCGATCACCGCCGTGATCGTCAGCGTCGGGCGACTGGG CGACCTGATGGGCCGCAGCCGCCTGCTGTTGGCGGGGTTGTTACTCTTCACGATTGCCTCCGCCTTGTGCGGCATGGCCCCGTCCCTCGGCCTGTTGATT GCAGCCCGCGCCCTGCAAGGCCTGGGCGCGGCGATCATGATGGCGATGACCATGGCGCTGGTGGGCGAGACCGTCGCCAGGGAACGTACCGGCCGCGCCA TGGGTGTGCTGGGCACGATGTCGGCCATGGGCACCGCGCTGGGGCCAAGCATGGGTGGCGTATTGATCGCCGGGTTTGGCTGGCGCGCGCTGTTCTTCAT CACCGTGCCGCTGGGGTTGCTGACCTTTGCCCTCGCCCGCCGCTCTCTGCGCGTCGACCGCCGCGAACAGCAGCCCACGTCATCCGGGTACAGTTTCTGG TCGACACTGCGGGATTCATCCCTGAGCACCGGCCTGGCCATGAGCGCACTGGTGTCGGCGGTGATGATGGCGACGTTGGTGGTCGGGCCGTTCTACCTGA CCCACGGCGCCGGCCTCGACCCCGCGTGGATGGGGCTGACGATGGCCGTCGGCCCCTGCGTTTCGGCAGTGATGGGCGTGCCGGCCGGCCGCTTGACTGA CCGTTTCGGCAGCGGCCCGATGACCGTCGCCGGGCTGCTGGCGATGGTGACCGGCTGCCTGTTGCTTTCACTGACGCCGCTCAACCTCGGGGTTGCCGGG TACATCGCCCCGCTGATCATCCTCACCCTCGGCTACGCCCAGTTTCAGGCTGCCAACAACACCGCCGTAATGAGCGATGTACTGACGGACCGTCGCGGCG TGGTCGCCGGTCTGCTCAACCTCTCACGCAATCTGGGGCTGATCGCGGGCGCCTCGGCATTGGGCGCGGTATTTGCGCAGGTGTCCGGTGACCTCGCCAC GGCCAGTCCCTACAACGTAGGACGTGGGATGCAAGCCACGTTCGGCGTGGCATTGGCACTGATTGGCGTAGGCCTTTTCCTGGCACTGCGCAGCCGGCTC GGCGCCACACGAATCTTGACAAGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATCGTAACGACTATTGTCTGACAACCTGATTACCAAGGTTGTCCCATGCTTGAGCTCCAGCGCCCTGATTCGCTCGTTATGCGCGTTGTCAGCGCCATT CGTGCAGAAATCGATTCCGGCCACCTGGCGCCCGAAGCGCGCCTGCCCACCGAACAGCAACTGGCTGAACAGCTGAACGTCAGCCGCTCGGTGGTGCGCG AAGCGATTGCCCAGCTCAAGGCCGACGGCGTACTCACCGCCCGCCGTGGCCTGGGCTCATTTATCTCCCAGACCCCGGCCGGCACGGTGTTCCGCTTTCC GGAAAAAAACGGCCGCCGCCCGGACCTGGCGCAAATGTTCGAAGTGCGCCTGTGGATCGAAACCCAGGCCGCCTCGATTGCCGCCCAACGCCGCGACGCT GCAGACCTGCAGCGCATGAAAAGCGCCCTGCAGGAAATGCACGACAAACGCGCCGACTTCGAAGCCGCCGCCCTGGCCGATGTGGAATTCCATCGCGCCA
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| Amino Acid Sequence |
>MFS transporter
MKSPTPRGTLVALSLSMLLASLGTSIANVGLPSLVQAFDASFQTVQWVVLAYLLAITAVIVSVGRLGDLMGRSRLLLAGLLLFTIASALCGMAPSLGLLI AARALQGLGAAIMMAMTMALVGETVARERTGRAMGVLGTMSAMGTALGPSMGGVLIAGFGWRALFFITVPLGLLTFALARRSLRVDRREQQPTSSGYSFW STLRDSSLSTGLAMSALVSAVMMATLVVGPFYLTHGAGLDPAWMGLTMAVGPCVSAVMGVPAGRLTDRFGSGPMTVAGLLAMVTGCLLLSLTPLNLGVAG YIAPLIILTLGYAQFQAANNTAVMSDVLTDRRGVVAGLLNLSRNLGLIAGASALGAVFAQVSGDLATASPYNVGRGMQATFGVALALIGVGLFLALRSRL GATRILTR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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