Pseudomonas sp. PAMC 25886, MUM_RS0109720
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004506, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGATCTTCCTGTCGGTGTTCAACGCCATCGTCGCCATCGTGATCCAGATTGGCCGGGTGGTGTTCAGCAGCGGCCGCGATGCGCTGTGGACGCCGACCAT CAACAAACTGTTTACCCGGATTCATCCGCGCTGGGATTCGCCGTGGTTGGCTACGCTGTTCCTGGCGATTCCTTCGGCGTTGCTCAGCTTCAGTTCCAAC CTGGCGGACCTGACGTCCTTCAGTGTGCTGCTGATCATGCTGGTGTACCTGATCGTCGCGCTGAGTGCGCTGATGAGCCGGGTCGTGCTGCGTGACCGTG AGCACCCGTATCGCATGCCGTTGTGGCCGGTGCCGGCCTTGCTGGCGGTGCTGGGCGCCGGCTACCTGTTGGTGACCCTGGCGATTGCCGCCTCGGTTCG CGACATCATGATTATCATCGGCCTGCTGGCGCTGTCGGTGATCCTGTATTGCATCAGTGGCCGGTTGAGTCCGGCGTTTCAGAAATTGTAAGGAGTGGTT
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| DNA Sequence for Gene |
>MUM_RS0109720
ATGCGCGCACGTCAAATGGGCATTACGTTGGGACTGGGTACGCCCGGTGAGTTGAATGCCATCACCGACGTTCCAGGGGTACGGGTCGGCCACAGCACGC TCAAGACCCGTATCGACGGCAAACAGGTGCGTACCGGCGTGACGGCGATCCAGCCGCGGGCCGGTGCTGCACGGCACCAGCCCTGTTTTGCCGGCTACCA CGTGCTCAACGGCAACGGCGATGCCACCGGCCTGGAATGGATCAGCGAGTCGGGGTTGTTGACCACGCCGCTGGCTATCACCAACACCCACAGCATCGGC ATCGTGCGCGACACACTGATCGCCCTGGAGCGCGAAAGCCTGGCAGACCCGGCGGTGTACTGGTGCATGCCGGTGGTGATGGAAACCTACGACGGTTTGC TCAACGACATCTGGGGCCAGCACGTCGGCCCGGAGCATGTGCGCGAGGCGTTGGCCAACGCTGAAACCGGGCCGGTGGCGGAGGGCGCCGTGGGCGGTGG CACCGGGATGATCTGCCACGAGTTCAAGGGCGGCATTGGCACCGCGTCGCGGCGGCTGCCGGCGGAGCAGGGCGGCTGGACCGTGGGCGTGCTGGTGCAG GCCAACCATGGCAAACGCCAGGAGCTGCGGGTGGACGGTTACCCGGTAGGCCGGCAGTTGATGGACATCCCGTCACCGTTTGCCTATCGCGGTACACCCG GCATGGGCTCCATTGTGGTGATCATCGCCACCGATGCGCCGTTGTTGCCCCATCAATGCCAGCGCCTGGCGCAGCGGGCGTCCATCGGCATTGCACGCAC CGGCGGCGGCACCGAAGATTCCAGCGGGGACCTGTTCCTGGCGTTCGCCACCGGCAATCAGGATTTGCCGGTGGCCGATTACGGGCGCAAGGGTTTGCCC CTCAGCACGCGGCTGGACATGGTCAATAACGACCACATTTCGCCGTTGTTCAGCGCGGCGGCGGAGGCCGTGGAGGAAGCGATCATTAATGCGATTCTGG CCGGCGAAGAAATGACCACCGACCACGGTGTGCGGGTACCGGCACTGGATGCGCAAACACTCCTGCCGGCACTGCGCCAAACCGGCTGGCGCGATCAATA A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATAGATTAAGTCTTGTCCCGGTAATACGGGACAAGTACTAAGATGGTGGCCATTCACTACTAACAATGACACGGTGACACTTTCTTAGTGCACCTCAATC AATACTTTGGATCCATTCCTCGCAAAACCACTTTAGCGGTATTTAATATTTAAATAGTTGTCTTTTTATAAGTCGCTACTAGCCAGCGTTTGCAGGAATT ATTCGCCGCGCCATGTTTTGCCCCGCAAAAATAGCGCTGGACGAATGATTTCAAGTTGTGTCAGTTTTCTTTCGCCTTCAAAAGGGGCGAGTGATAGGAC TTACTCGCCAGAGTGGGTTCTATCGGACAAAAACTGTTCCACTTGCAAACAAGGAAGTACGTTTATGTCAAAAGTAAAAGACAAAGCTATTGTATCGGCG GCTCAAGCAAGTACTGCCTATACGCAAATCGATAGCTTTAGCCATCAATACGACCGCGGCGGCAACCTCACGGTCAATGGCAAACCCTCGTTCACCGTTG
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| Amino Acid Sequence |
>D-aminopeptidase
MRARQMGITLGLGTPGELNAITDVPGVRVGHSTLKTRIDGKQVRTGVTAIQPRAGAARHQPCFAGYHVLNGNGDATGLEWISESGLLTTPLAITNTHSIG IVRDTLIALERESLADPAVYWCMPVVMETYDGLLNDIWGQHVGPEHVREALANAETGPVAEGAVGGGTGMICHEFKGGIGTASRRLPAEQGGWTVGVLVQ ANHGKRQELRVDGYPVGRQLMDIPSPFAYRGTPGMGSIVVIIATDAPLLPHQCQRLAQRASIGIARTGGGTEDSSGDLFLAFATGNQDLPVADYGRKGLP LSTRLDMVNNDHISPLFSAAAEAVEEAIINAILAGEEMTTDHGVRVPALDAQTLLPALRQTGWRDQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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