Pseudomonas sp. PAMC 25886, MUM_RS0109435
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004504, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGGCCATGGCGCGCACACCGGAAGAACTGTCGAAGAAGTTTCGCTACAACCAGCGTCGTGAATTGCGCTTGCTGGAAGAGGCGGGCGGCGTGGTGCGGG CGGTCAGCGAGTTTTCCAGCAGTGAGTTGGCGGCGATTTACTGCGACCTGTTCCAGCGACGCTGGGGTTTCCCTGCAGCGGGTGCCGAGCGTCTGGCCGA AGTGCTGGAGTTGCTCAAGGAATTTCTGTTCGGCTCGGTGCTGTTTCTCAATGACGCCGCGATTGCCGTGCAACTGGTGTATCAGGTGCAGGCGCCGGCG TGGGTCAGTGCCGAGTACGTCAACGGGGGTGTCGACCCTGAAACCAAGGCGTTCAGCCCCGGTAGCGTGCTGAGTTTCCTCAACACCCAAAGTGCCTGGG AACAGGCGCGGGCGAGTGACAAGCCGCTGCGTTTCTCCTTTGGGCGTTCCGATCGTGAATACAAGGAGCGCTGGTGCAACCCGGTGCCGGTGTTTAGCGT
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| DNA Sequence for Gene |
>MUM_RS0109435
ATGAGCCGCAAGCAGCAACTCCTCAAGCAGCATCGACGCAACAAGCGCATCGCGCTGTTGGTTGGCCTGTTGCTGCTGGTGGCGGTCGGTGTGCTGGTGG CCTGGTGGTTACCGCCGGTGCTGGCCGTGGTGCTGTGGGCCGCCCATGAAGCCTGGTTTGCCGATCACCTGTTCTACTCGCCTAAAGACGACTATGAGTA CGCGTTTCCCGAGGGGAGCGAGTGCGCGGGGCTGCGTCTTGAGGCGGGGCGGCTGGTGTTGGACACGCCCTTGGTGGGCGATGAAACCCTGATCGTCGGT ATTGAGCTCAAAAGCGCCTGGCTCGGACGTTTTCTCGACCCCGCAATAGATGTGCTGGGCCTTGAGACGCCGGACCGGCAAGTCTTCGAGCGTGGCGTCG CGGGTCGGCGTTACCTCAACCTGACCGGCGCGGGCGAAGCACTGGCCGCCGGCAAGCTGCGTTTGCGCGGGCGCTTCTGCCGGATCAAGGGGCAGCCGAC GCTGTGGCGGTTCCGCCAGCCGGATTACCGTCGCCAACGGGTGATGGTGATCGCCCCTCATGCCGACGATGCCGAATTGGCCGCCTTCAGCCTTTACAGC CAGGCCGATGAGAGCTGGATCGTCACCCTCACGGCGGGCGAAATCGAAGCCGATCACTATCAACAAATGGGCATGCCCAAGGCGGATGCCGCACGGCTCA AAGGCCGCCTGCGTGCCTGGGACAGCGTTACCGTGCCCCGCTGGGCGGGCGTTCCCGAGGCGCAGTGCGTGCAGTTGGGTTACTTCTGCATGCAGCTACC GGCCATGCAGGCCGCGCCGGACCAGCCCCTGGCCTCCCGGGAAGCCGGTTTGGACGATACGCGGCTGTTTCGCCAGTTCAATACCTTGGCCTTGCCCGGG GATGTAGACGGCGCGCCGACCTGGCACAACCTGATTGCCGACCTGCGGGCCTTGCTGCTCAAGGCGCGCCCCCAGGTGATCGTGTTGCCGACGCCGCTGC TGGATCCGCACCCGGATCATATCTGTGCGCACGCCGCGATTCTCGAAGCCCTGCAAGGCCTGGAGTGGCAGCCGGGTACATTGCTCGGTTACGCCAATCA CCTGCATGATAACGACCGCTGGCCCATGGGCGACTCGGGCGCTGGCGTGGCGTTGCCGCCGCGTTTTGATACCACGGTTGAGCTGGTGCCGTGCAGCTTG CCGCTGACGCTGAGCCAGCAGCAGGACAAGGCCATGGCCCTTGGCATGATGCACGACTTGCAGCCGCGGGCGCCGTTCAAGCGTCGCGTGCGCAGGTGGT TGCAGCAATTACTGGCGGGCCGCAGTCCATCGCCTTACGGAGAGAATGAATTCTTCCGCAAAGCGGTGCGCCGTCATGAGTTGCTCTGGGTGTTGAAGCA GGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACCTTATTGAAGGCAGGCTTGCAGTGCCTGCCGCCCCTTTTTCACCGGGCTGCGTGCCCGCAGCCAGATTGCAGCATGGAGAGTTATGAAGCCTCGTTT CAAGGTTTTGCAGTTACAGCCGGACTACAACGTCAAGACCCATGACTTTGCCGACCTCGGCGAGCAGATCGTCAAGGCCTTGCCGGCTGAACGTTTCGAG GTCACATCCGGGTTCCTCAGCGGCCGTCCGCTGCCCGGCCAGCCCCTGAGCGTGGCTGAACACTCCCATTATTTCGAGCTGCCGGAAAAATCCCTCAAGG GCATTCGTTTCGGCGCCATGTGGCAGATCTACAAGTATTGCCGCGAGCAGAAATTCGATGTGGTCATCTGTAACCGCTTCAAGTCGGTCAACATGATGCT GTCCCTCAACCGTTGGCTGAAGATCCCCCTGTGCATTGGCATCTCCCACGGTTTTGGCGAGTACGCCCGTGGCTACCGCCGCCGCCAGACACAGAAGTGG
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| Amino Acid Sequence |
>GlcNAc-PI de-N-acetylase
MSRKQQLLKQHRRNKRIALLVGLLLLVAVGVLVAWWLPPVLAVVLWAAHEAWFADHLFYSPKDDYEYAFPEGSECAGLRLEAGRLVLDTPLVGDETLIVG IELKSAWLGRFLDPAIDVLGLETPDRQVFERGVAGRRYLNLTGAGEALAAGKLRLRGRFCRIKGQPTLWRFRQPDYRRQRVMVIAPHADDAELAAFSLYS QADESWIVTLTAGEIEADHYQQMGMPKADAARLKGRLRAWDSVTVPRWAGVPEAQCVQLGYFCMQLPAMQAAPDQPLASREAGLDDTRLFRQFNTLALPG DVDGAPTWHNLIADLRALLLKARPQVIVLPTPLLDPHPDHICAHAAILEALQGLEWQPGTLLGYANHLHDNDRWPMGDSGAGVALPPRFDTTVELVPCSL PLTLSQQQDKAMALGMMHDLQPRAPFKRRVRRWLQQLLAGRSPSPYGENEFFRKAVRRHELLWVLKQD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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