Pseudomonas sp. PAMC 25886, MUM_RS0109395
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004504, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCAACCCGGCCGATCAGCACTCGTTCATCGTCACTGAAGAGCTGGCGCCTATCGTCAGCCTTGAAGACCTGACCATGGACTGGGTCAAGCAGCCGCCTG TGCCGGCGATTCGTCATGCCTTGACCGTTGAGCTTGCGCGCACGCTGGGCACGATGCACCGGGGGGGCGTGAACCATCGTGATTGCTACCTGTGCCACTT CCTGTTGCACACCGACCAACCGGTTACCGTGCACAACATCAAGCTCTCGGTGATCGACCTGCACCGTGCCCAGGTGCGTTCGAAGATTCCACGGCGCTGG CGTGACAAGGACCTGGCGGGGCTTTATTACTCCGCCCTGGAGATTGGTTTGACCCGGCGCGACAAATTGCGGTTTCTCAAGGCCTACTTCCAGCAGCCTT TGCGCCAGATCCTGAGCGAGCAAAGCGCGCTGCTGGCGGCGCTGGAACGCATGGCCGCCAAGCTTTACGCACGCAAGCAACGATACGGGGATGCGCTCTG
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| DNA Sequence for Gene |
>MUM_RS0109395
ATGGCGGGTTGGAACCTGGAACCTGCTTACGCCGCCCTGGCGGATGACTTTGGTAGCCTGGAGGCGGTGTTCGCCTTGCAAGGGGAGCGCCTGACCCGCG ATCCGTTGTCCGAAGTGATTCGCGTGGAGCGCGGCGGGGTCAACTATTACGTCAAGCGCTACGTCGGCGCGGGCAAGGGTTTGCGCCGCTACCTGGGCAA GCCACGGGTCAAGTCCGAATGGCAGAACCTCAAGCGTTTCGCCAAGTGGGGCATTCCTACCGCCGACGTGATTGCCTGGGGCCTGGAGCGTAAAGGCCTG GCTTATCACCGTGGCGCGATGATCACCCGCGAACTGCCGAAGACCGAAGACCTGTCGGCATTGGCCGAGCGCAAAGACCCGCGACTGTCTGACCCGGTGT GGGTCAATAACATCAGTCGCCAGCTCGCTGAATACACGCGGACCATGCATGACAACCGGTTTACCCACAACGATTTGAAGTGGCGCAACCTGTTGGTCGA CGACCAGCAAACCCTGTACCTGATCGATTGCCCCAACGGCGATTTCTGGCGCGGGTTCTGGCTCAAATACCGCATCACCAAGGACCTGGCTTGCCTGGAC AAGGTCGCCAAGTATCACTTGTCGGCCACCCAGCGCCTGCGCTTCTACATGCAATACCGTCAGCGCAAGCACTTGAGTGCGTCGGATAAACAGCGAATTC GCCACGTGGTGAAGTTTTTCGAGGGGCGAGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGATTTCCTGGCGGCCGAAGACCGAGCATTGCTTGAGCGCAACGGCCTCGGCACTTTTGACGCGCTGTGGGCCAAGCAACTGGATGCCGTGGACGAGCC CAATACCAGCCGCGGCGGTTGGAGCAGCGTGTTTCGCCTCGAACTCGAAGGCCAGGGTTATTACCTCAAGCGCCAGAGCAACTACTTGACGCGCACCTTG CACCGGCCGTTTGGCGAGCCGAGTTTTGCCCGTGAGTTTCGTAATATCAGCCGCTATCAAAAGCTGGGTATTCCGGCGTTGCAGGCGGCGTTTTTCGGTG AGCGCAAAGTGGCGGGCGAACATCGGGCGATGTTGCTGACCCGGGCGCTGGATGGCTGGAATGACCTGGATTCATTGCTGGAGCAATGGGCTGAATTGAG CGGCGCGCAACAGCGCGCGATCCTGTTGGCCTGCGGTCAGTTGGCGCGCCGGCTGCACAGCGTGGGCCAGGTACATGGCTGTTTTTATCCCAAGCATATT
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| Amino Acid Sequence |
>putative heptose kinase WapP
MAGWNLEPAYAALADDFGSLEAVFALQGERLTRDPLSEVIRVERGGVNYYVKRYVGAGKGLRRYLGKPRVKSEWQNLKRFAKWGIPTADVIAWGLERKGL AYHRGAMITRELPKTEDLSALAERKDPRLSDPVWVNNISRQLAEYTRTMHDNRFTHNDLKWRNLLVDDQQTLYLIDCPNGDFWRGFWLKYRITKDLACLD KVAKYHLSATQRLRFYMQYRQRKHLSASDKQRIRHVVKFFEGRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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