Pseudomonas sp. PAMC 25886, MUM_RS0108300
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004500, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCATCGAGGCTGCCGGTGACTTCTTTACGGTAACGGGCGATGAAGGGCACCGTGGAGCCTTCATCCAGTAGAGCGACGGCCGCTTCGACCTGTTGTGGG CGTACACCGAGTTCCTCGGCGATGCGGCTGTTGATGCTGTCCATAAAACCACCTGAAATTCTGAAAGCAGGCTCGCAGGCCCGGAAAACAAGGCGTGCGA GGCTGGTTGAGCGGCCCGACTGGCGCCGCTGCCTGGGTCAAGAGGCAGCCTATTGACCCTCGAAATCGAAAAAATCACTACAAGCGGGTGAAAAAATCCC CTGGCAGTAAACGGTAACGAACGGACGTTGCCCTGCACAAAGGCGCCGCATTATAACCGGCGATCCGCCCTTGGGGGGATTGCGGCCAAGGTTGTAAGGC GCGGGTTCGCTGGCGGTAGAGGAAAAATCTGCTAACAATGCACACGGTGCGTATAACGGCAGCTACGCCATAATGCGCGCCGAGATAAGAGGAGCATCTA
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| DNA Sequence for Gene |
>MUM_RS0108300
ATGAGCAGCACTGCACAAACTGCTGAAGGCGAAAAAATTCTCATCGTTGATGACGATCCGGGGCTGAGCAGCCTGCTGGAGCGCTTCTTCAACTCCAAGG GCTATCGTGCCCGCGCGGTGCCAAACACCGAACAGATGGACCGCCTGTTGGGACGTGAAGTCTTCAACCTGGTGGTGCTGGACCTGATGCTGCCCGGCGA AGACGGCCTGACCGCCTGCAAACGCCTGCGCGGCGCCAACAATCAGATCCCGATCATCATGCTGACCGCCAAGGGCGATGAGCTGAGCCGCATCAAGGGC CTGGAACTGGGCGCCGACGATTACCTGGCCAAGCCGTTCAACCCGGATGAACTGATGGCGCGGGTCAAGGCCGTACTGCGTCGCCAGGCCGCCCCGGTAC CGGGCGCACCCGGCAGCGAAGACGAAAGCGTGACCTTCGGTGACTACGAGCTGTCGCTGGCCACCCGTGAGCTCAAGCGTGGCGATGAAGTGCACATGCT GACCACCGGCGAATTCGCCGTGCTCAAGGCACTGGTGATGAACGCCCGCCAGCCGCTGACCCGCGACAAGCTGATGAACCTGGCCCGTGGCCGCGAGTGG GACGCCCTGGAGCGCTCCATCGACGTGCAGATTTCCCGTCTGCGCCGGATGATCGAGCCTGATCCATCCAAGCCGCGTTATATCCAGACGGTGTGGGGCG TGGGTTACGTGTTTGTGCCGGATGGCACTGCAACCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCAATGATTTGCAGAAGCGGGCCTGCCGGTGATGATTCGATAAGAGTCAGCCGGTTGCCCGGCGTTTGCAATTCTGCGAGCCTCGCTCGCTCCTGCCAGG TGTCTAGCTGTTTTTTATGAAAACCCCGTTGTGGTTCCCGCAGAGTTTCTTCTCACGCACCCTTTGGCTGGTGCTCATCGTCGTACTGTTTTCCAAGGCC CTGACACTGGTTTATCTGTTGATGAACGAAGACGTGCTGGTGGACCGGCAGTACAGCCACGGTGTCGCCTTGACCTTGCGCGCCTATTGGGCCGCAGACC CCGAGAACCGCGAGAAGATCGCCAAGGCCGCCACCCTGGTTCGGGTTGCGGGCGCAGGCGTGCCCGAGGGTGAGCAACATTGGCCCTACAGCGAAATCTA TCAGCGCCAGATGCAGGCCGAACTGGGTGAAGACACCGAGGTGCGGCTGCGCATGCATGTGTCGCCAGCGCTGTGGGTGCGGGCGCCGAGCCTGGGCGAG
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| Amino Acid Sequence |
>chemotaxis protein CheY
MSSTAQTAEGEKILIVDDDPGLSSLLERFFNSKGYRARAVPNTEQMDRLLGREVFNLVVLDLMLPGEDGLTACKRLRGANNQIPIIMLTAKGDELSRIKG LELGADDYLAKPFNPDELMARVKAVLRRQAAPVPGAPGSEDESVTFGDYELSLATRELKRGDEVHMLTTGEFAVLKALVMNARQPLTRDKLMNLARGREW DALERSIDVQISRLRRMIEPDPSKPRYIQTVWGVGYVFVPDGTATK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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