Pseudomonas sp. PAMC 25886, MUM_RS0107440
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004498, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGTGACGCTGCCAGTGCAGCTTCAGCGGGATAGGTACTTTTGCGTAACCGTAGCCCGGAAGGTCGACCAGACGCCGATCATCGTCTAGCTTGAAGAAGT TGAGGAGCTGTGTGCGCCCCGGGGTTTTCGAGGTGCGAGCCAGGCTGGCGTGGGTCAGGGTGTTCAGCGCGCTGGATTTACCGGCGTTGGAACGGCCGGC GAATGCGACTTCGAAGCCTTCGTCATCGGGGCATTGGTCGACTTTGGCGGCGCTGAGCATGAAGGTGGACTGTTGGCACAGGCCGAGGATGGGATTCTTG AGTTGCATGAGTTTTCCGATGTGGGCGGTGCCGGGAATGGGTGCGGCAAGCGGTGTCGTTTCCGTTTCAGTAGCGCCAGTATATAATGCCGCAGATTTTG TGTGTGCTTTGTCCCAGCGAAGGATGAAGTTCACGGGAGCGATAGACCTTTATTGCGCATTAGAACGCAAAACGCTCTCAAACCCTGAAAAGGTCGATGT
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| DNA Sequence for Gene |
>MUM_RS0107440
ATGACCAAGTGGCTGCTGGCTTTCGGTGTCTTGATGCCACTTTACAGTGCGCAGGCTACACAGGATCCGGAGGCTGTGTACAACCGCGTTTGCGGGGCCT GCCATGCCGGACAGTTGCCCAACGCCCCGAAACGGGGTGACCAGGCAGCCTGGAAGCCAAGATTGGCTCAAGGTATGGACACGCTGGTGCAACACGTGAC CCAGGGTTTCAAGGCGATGCCGCCGCGTGGTTTGTGCATGGACTGCAGTACCGAGGATTACCAGGCCGTCATTCAGTTGATGGTGAGTAAACCCGGTCCA TAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTCTTTAACCCTTAGCCGTAGTTGGATTAGCTGATGAACAAACTGATCGTGAGTCTGCTGTTGACCTTGGGCATCACCGGTGTTGCCCATGCCGCAGGCG ACGCCACTGCCGGCCAGGCGAAAGCCGCCGTATGTGGTGCTTGCCATGGACCGGACGGTAATAGCCCGGCGCCAAACTTTCCAAAGCTGGCCGGCCAGGG TGAGCGTTACCTGACCAAGCAGATGCACGACATCAAGGACGGCAAGCGTACGGTCCTGGAAATGACCGGCTTGTTGACCAACCTCAGCGATCAGGACCTG GCGGATATCGCGGCGTATTTTGCCAGCCAAAAGGGCAGCGTGGGGGCTGCTGATCCAAAACTGGTGGCCCACGGTGAAGAACTGTTCCGTGGCGGCAACC TGGAAAAAGGCATGCCTTCGTGCATCGGTTGCCACTCGCCTAATGGCGCAGGTCTCGCGGCTGCCGGCTTCCCGCACTTGAGCGGCCAGCATGCCCAATA
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| Amino Acid Sequence |
>cytochrome
MTKWLLAFGVLMPLYSAQATQDPEAVYNRVCGACHAGQLPNAPKRGDQAAWKPRLAQGMDTLVQHVTQGFKAMPPRGLCMDCSTEDYQAVIQLMVSKPGP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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