Pseudomonas sp. PAMC 25886, MUM_RS0106810
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004497, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGGCTTTCGGGCAGCTGAAGCGGAATTTCCACTGGTTGCCGGTCTTGTCCGTCACTTCCTGTTTGCAGCCCGATTGCGGGTCGGTCAGCGGGATGGA GTCGGACGCTACCTGGGCTTGTGTCAGGCACACCTGCACGCCTTTGCCGGCCATGGTGATGCCTTGCTTCTCAAGCATGGCCCGTTGTTCGGGAGTCATC TGTTGCTTGAGCTGACCGAGGATCAGCGACAAGTCCGGCAGGTCCTGGTTATCGACCTTCATGTTGCTGGTGGTCAATTCCCACAAGCCCGGCGCCAACA TCTGCGCTTGCGCCGCCACGGGCAGCGTTAAACCAACAACCATGGCCAAACCAAGCAGACGAGCATTCATCGGGTAACTCCTGGGTAATTGTCGGCGTTA GACGCCGCAAAAGCGCCAGTGTTGCACAGCAAATAAAATAGCGACATTCGTGGCCGAACATGGTCTGTTAGGCACTTGTTTGTCAGGAGTACCGTTGTCC
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| DNA Sequence for Gene |
>MUM_RS0106810
ATGGATTTCTTTGGCCCGCACCTGCTCGCCTATTTCATCGCCACCCTGCATTTTCTGGGCACCCTTGCCGCCATCCATGCGGTGCTGACCGTCAGGACCG CCCAAGGCTCGATTGCCTGGGCCTTGTCGCTGATGTTCATCCCTTACCTGACGCTGATTCCCTACCTGATCTTCGGCCGCAGCACCTTCGACGCCTACAT CCAGGCGCGGCGCCAGGCCAACCAGGAAATGCACAAAGCGATTACCGAGCTGAACTGGCGCCCGTGGGTCGAAGAAGCACTGGCCGCGCGCAACTCCCAA GCCTATGCGTCACTGCGGGCCATGCCCAAGCTGGGGCGCATGCCGTGCCTGGCGAACAATCAGGTGCGCTTGCTGATCAATGGCGAGGCCACGTTCAGCG CGATTTTCGAAGCCATCCGTTCCGCGAAGACGGCCGTCTTGTTCCAGTTCTTCATCATTCATGACGACGAACTCGGCCGCCGGTTGCACACGTTGCTCAA GGAAAAGGCCGCCGAAGGCGTGGCGATTTTCGTCCTGTATGACCGTATCGGCAGCCATGCCCTGCCCCATCGTTATGTGCAGTCGCTGCGGGACGCCGGG GTGCAGGTCAAGGCCTTCGCCACGCGCAGTGGCTGGCTAAACCGCTTCCAGGTCAACTTCCGTAACCACCGCAAGATCGTGGTGGTCGATGGCATTACCG GGTTTGTCGGCGGGCATAACGTCGGCGATGAATACCTGGGCAAGAAGCCGCCCCTGGCGCCGTGGCGCGACACCCATGTGCAGGTCAGCGGCCCGGTGGT GGCGTGCTTGCAGGAATCGTTTGCCGAGGACTGGTTCTGGGCCGCGCGCGAGCTGCCGCCGCTGCTGCTGCCGGACACCTATCCCGATGACGGCGTGCTC TGCCAGTTGCTGGCCAGCGGCCCGGCGGATCCCTACGAGACGTGCTCGCTGTTTTTCGTCGAGGCGATTCATGCGGCGACCGAGCGGGTGTGGATCACCA GCCCGTATTTCATTCCCGATGAAGCGGTGTTTTCCGCACTCAGGCTGGCGGTGTTGCGCGGGGTCGATGTACGCCTGCTGCTGCCGTCGCGGCCCGATCA CCGCATCGTGTACGCGGCCTCCAGCCTGTACGCGATCGAAGCCGTGCGCGCCGGGGTGCGGGTATTCCGCTACACGCCGGGGTTCCTGCATCAGAAAGTG GTGTTGGTGGACAGTGAAATCAGCGCCATCGGCAGTGCGAACCTGGATAACCGTTCATTCCGGCTGAATTTCGAAGTGATGTTGCTGACGGTGGATGACA CCTTCGCCAGTCAGGTGGAGCATATGTTGCTGGATGACTTCGCCCTGGCCCATGAAATCAGCCAGGAAGAAAGCCGCCAGACCCATCGCCTGCAACAACT GGGCATGCGGGTCGCGCGGCTTATTTCTCCAATTTTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCTTGCACCGAACCAAATGTGGGAGCGGGCTTGCTCCCACATTTAGATCACCGGTGCCACTGCTTACTGATACAGGTCATCCCGCGTCCACGGCAGCTC ATGGCTACCATCGGCATGGGGTTTCACCGCCAGAATCTGGTGCAGGTTGATCCAGCCCCGGGCAAACGCATAGGCACAGCCGGCCAGGTACAGCCGCCAG ATGCGCAAGGCTTGCTCCGGCACCATCTTGCCCGCCGCTTCCAGGTTGTCTTCCAGGCGCTCGCTCCAGTGATCCAGCGTGCGCGCGTAGTGCAGGCGCA GGCTTTCGACGTCGACCACTTCCAGCCCGACTTCGCTGATCTCGGCGGTCATCATCGCCAGGTGCGGCAGCTCGCCATTGGGAAACACATAGCGCTCGAT AAAGTCCCCGGCGCCACGGCCCACAGGCCGGCCATCGGTGTGCTTGGCGGTAATGCCATGGTTCATCACCAGGCCGCCCTCACGCACCGCGCCGTACAAA
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| Amino Acid Sequence |
>cardiolipin synthetase
MDFFGPHLLAYFIATLHFLGTLAAIHAVLTVRTAQGSIAWALSLMFIPYLTLIPYLIFGRSTFDAYIQARRQANQEMHKAITELNWRPWVEEALAARNSQ AYASLRAMPKLGRMPCLANNQVRLLINGEATFSAIFEAIRSAKTAVLFQFFIIHDDELGRRLHTLLKEKAAEGVAIFVLYDRIGSHALPHRYVQSLRDAG VQVKAFATRSGWLNRFQVNFRNHRKIVVVDGITGFVGGHNVGDEYLGKKPPLAPWRDTHVQVSGPVVACLQESFAEDWFWAARELPPLLLPDTYPDDGVL CQLLASGPADPYETCSLFFVEAIHAATERVWITSPYFIPDEAVFSALRLAVLRGVDVRLLLPSRPDHRIVYAASSLYAIEAVRAGVRVFRYTPGFLHQKV VLVDSEISAIGSANLDNRSFRLNFEVMLLTVDDTFASQVEHMLLDDFALAHEISQEESRQTHRLQQLGMRVARLISPIL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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