Pseudomonas sp. PAMC 25886, MUM_RS0106215
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004496, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGGGCGATGGCGACGGTGGCGTCGGTGGCCAGCACCAGGGTCGTCAGCAGGTCGTCGGCAATGCCTTGGGCCAGGCGGGCGATCAGGTCGGCGGTGGC CGGGGCGATCAGCACCAGGTCGGCCCACTTGGCCAGCTCGATGTGGCCCATGGCGGCTTCGGCCGCAGGGTCCAGCAAGTCGAGGTGAACCGGGTGGCCG GACAGGGCTTGCATGGTCAGCGGGGTAATGAATTCACTGCCGCCACGGGTCATGACCACGCGCACTTCGGCGCCTTGGTCCAGGAGCCTGCGAACCAGCT CTGCGCTCTTGTAGGCGGCAATGCCGCCGCCGACGCCGAGAACGATGCGTTTCCGATACAGACGCTGCATTGGCTTGCCTTTCCAGTTCAGTGATGGCGT TGCGATGCCCCCTCCCCAGGTGAAATCGCACGCAAAAAGATGGCCTAAGATACCACAGCGTCCGCCATGCAACAGCGGCGCACATGCACACGGAGGTGCC
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| DNA Sequence for Gene |
>MUM_RS0106215
ATGAGTATTCGTGATTGGCCTGCGGCCGAGCGCCCGCGGGAGAAGCTGTTGGAGCTGGGGGCGGCGAGTCTTTCCGACGCCGAATTGCTGGCGATTTTCC TGCGCACCGGGGTGGCCGGTAAAAGTGCCGTCGACCTGGCGCGGCACCTGCTGGCGCAATTTGGCAGCCTGCGGGCACTGATGGAGGCCCGGCGGTTGGT GTTCAGCCAGCACCTGGGGTTGGGGCCGGCGAAGTTCGCCCAGCTCCAGGCCGTGCTGGAAATGGCCCGTCGCCATCTGGCTGAGCGCCTGCGCTGCGAT TCGGTGCTGGAAAGCCCGGAGGCGGTGCGCGACTACCTGAAGGCGCTGTTACGCCATGAGCCTCACGAGATATTTGGCTGCCTGTTTCTCGACTCCAAAC ATCGGGTGCTGGGGTTCGAGAAGTTGTTTCAAGGCACCATCGACACCGCCACGGTCTACCCCCGGCAAGTGGTCAAGCGCGCCCTGGACTACAACGCCGC CGCCCTGATCCTGTGCCACAACCATCCTTCCGGCAGCGCCGAGCCCAGCATCGCTGATCGAAAAATGACCAGGGTGCTGCAAAAGGCTCTGGAGATGGTG GACGTGCGCGTGCTGGACCACATCATTGTGGGGGAGGGTGACCCGCTGTCGATGGCGGAGTATGGGTGGATGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTGAAAGCCGCTGCAAGTGGCAAGCTGCAAGCCTCAAGCAGGCTTGCAGCTTGCAGCTTATGGCTTGACGCTGACTTTCGAGTAATCCTGACGCCCGAA CGGGCTCACCTGGTACCCCTCGACATTCTTGCGAGTCAGGGCGAATGCGGTCGGATGCGCCAGTGGCAGCCACAGTGCCTGTTGCTGGATCTGCGCCTGG GCCTGCTGATACAGCTTGCTGCGCACGCCCTGTTCGCTGGTGGTCTTGCCGGCGCTGATCAGCTTGTCCAGTGCCGGGTCGCAGTAGCGGGCGAAGTTGG TGCCGGACTTCACTGCCGCGCAGGAGAACTGCGGCGTGAGGAAGTTATCCGGGTCGCCGTTGTCGCCGGCCCAGCCCATGAACAACAGGTCGTGCTCACC CGCCTTGGCGCGGCGGATCAGTTCGCCCCACTCGATCACGCGGATTTCAGCCTGGATGCCGACCTTGGCCAGGTCCGCTTGCAGCAACTGCGCGCCGAGG
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| Amino Acid Sequence |
>hypothetical protein
MSIRDWPAAERPREKLLELGAASLSDAELLAIFLRTGVAGKSAVDLARHLLAQFGSLRALMEARRLVFSQHLGLGPAKFAQLQAVLEMARRHLAERLRCD SVLESPEAVRDYLKALLRHEPHEIFGCLFLDSKHRVLGFEKLFQGTIDTATVYPRQVVKRALDYNAAALILCHNHPSGSAEPSIADRKMTRVLQKALEMV DVRVLDHIIVGEGDPLSMAEYGWM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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