Pseudomonas sp. PAMC 25886, MUM_RS0106100
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004496, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCCGGAAGCGACTGAGGCGCGCCAGCAGCCAGCGCATGGTCAGGGTGGACGGTGCCTTCATGCGCAGGATGTCGTCCTCCGCGTTCAACGTATGGCAG GCGCGTTCCAGGGCCGCAAAGCCTTCGCGCACGCCCGGCAGCAGCAGGCGCGCGGCCTCGGTGAGTTGCAAGGTACGGCCGCTGCGCTGGAACAGGCGGC AGGCGAAATGTTCCTCCAGGGTACGAATGTGCCGGCTCACCGCACTTTGGGTGATCGACAACTCCTCCGCCGCCCGGGTGAACGAGTTGTAACGGGACGC CGCTTCAAAGGCGCGTAACGCGTAAAGAGGAGGGAGACGACGAGACATGGGGAAAGCTCCGACGGCGCAATATCGAAACCCTACCAGAATCATTCAGGCA TGAGTTTTAATCATGCGAACCATCGGATTTATCCCTTTGTGCAATGCGCTGAGAGCGCCGAGAATCAACCCTTCCACTCTTACCTGACTTTTTGAGCGTG
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| DNA Sequence for Gene |
>MUM_RS0106100
ATGATCATGCAGCATCCGGCGCGTACCGAACTCTGGGCCATTCTGCGGCTGTCAGGGCCGTTGATTGCCTCACAGTTGGCCCACATGCTGATGGTGCTGA CCGACACCCTGATGATGGCCCGCCTGAGCCCCGAGGCCCTGGCCGGCGGCGGCCTGGGCGCGGCGAGCTACTCGTTCGTGTCGATTTTCTGCATCGGCGT GATCGCGGCCGTGGGCACGCTGGTCGCCATCCGCCAGGGCGCGGGCGACATCGAAGGCGCCACCCGGCTGACCCAGGCCGGATTGTGGCTGGCCTGGTTG ATGGCGCTGGTGGCCGGCTTGCTGCTGTGGAACCTCAAGCCAGTGCTGCTGATGTTCGGTCAGACCGAAACCAACGTCGCGTCCGCCGGCCAGTTCCTGA CCATCCTGCCATTCGCCCTGCCCGGCTACCTGACGTTCATGGCGTTGCGCGGCTTCACCAGCGCCATCGGCAAGGCCACGCCGGTGATGGTCATCAGCCT GGGCGGCACGGTGATCAACTACCTGCTCAACCATGCCTTGATCGAAGGCATGTTCGGCCTGCCGAAACTCGGGCTGGTGGGCATTGGCCTGGTCACGGCC ATCGTTGCCAACTGCATGGCCCTGGCGCTGGTCTGGTACATCAAATACAACCGCGCCTACGACGCTTATCCGCTGCGCAAGGGCCTGCTGCGGCCCAACC TGCATTACCTGCGGGAACTGTGGCGGCTGGGCCTGCCGATTGGCGGCACCTACGCGGTGGAAGTCGGGCTGTTTGCCTTCGCGGCGCTGTGCATGGGCAC CATGGGCAGCACCCAATTGGCTGCGCACCAGATTGCCCTGCAGATTGTGTCGGTGGCGTTCATGGTGCCGGCAGGCATGTCCTACGCAATCACCATGCGC ATCGGCCAGCATTACGGTGCCGGGCAGTTGTTGGAGGCGCGGCTCGCCGGGCGGGTCGGTATCGGCTTTGGCGCGCTGGTGATGCTGGGCTTTGCAGCAG TGCTGTGGCTGTTCTCGCACCCACTGATCAGCCTGTTCCTCGACCAGAACGACCCGGCCTTTCGCGATGTGATCAACCTCGCCGTCAGCCTGCTGGCCGT GGCCGCGTGGTTTGAGCTGTTCGACGGTGTGCAGACCATCGCCATGGGCTGCATTCGCGGGCTCAAGGATGCCAAGACCACGTTCCTGGTCGGGCTGGGT TGCTACTGGCTGATCGGCGCACCGGCCGCGTGGCTGATGGCGTTTAACCTCGGCTGGGGGCCGACGGGCGTGTGGTGGGGGCTGGCCTTGGGCCTGGCGT GCGCGGCGGTGAGCCTGACCTGGGCGTTTGAACGGAAGATGAAGCGGATGATTCGCCAGGAGCCTGAAACCCACCGCGGGTTTCAAGCCGCACAGCCTGA GTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGACTGTACTCGGTCAGTGTAGGAGTTGGCTTATGTGGGAGCCGGGCTTGCCCGCGATACAGGCACCTCGGTAGGTCAGACACACCGCGGTGATGCTATC GCAGGCAAGCCAGCTCCCACAAAAGCTGGCTCCCACAGTTTTGATCGGGTTTACAACGTCAGATCACGCCGCCCACCAACTCCTGGCTGTCACCAAACGT CAGGTAGTCCACCAGTTCCGCCAACGGTAGCGGCTTGCTGATCAGGTAACCCTGAGCCTGGTCGCAGCCGAACAACCGCAGCAACGCCAGTTGTTCTGCC GTTTCAACGCCCTCGGCCACCACTTCCAGATTCAGGTTGTGGGCCAGGTTGATCATGGCGTGGACCAGCTTGCGGTTCTCTTCGCGCTCTTCCATGCCGC CGACAAAGCTCTTGTCGATCTTGAGCAAGGCAATCGGCAGGCTGTTGAGGTGCACGAACGACGAAAAGCCAGTGCCAAAGTCATCCAGGGAAAAGCGCAC
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| Amino Acid Sequence |
>multidrug transporter
MIMQHPARTELWAILRLSGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSFVSIFCIGVIAAVGTLVAIRQGAGDIEGATRLTQAGLWLAWL MALVAGLLLWNLKPVLLMFGQTETNVASAGQFLTILPFALPGYLTFMALRGFTSAIGKATPVMVISLGGTVINYLLNHALIEGMFGLPKLGLVGIGLVTA IVANCMALALVWYIKYNRAYDAYPLRKGLLRPNLHYLRELWRLGLPIGGTYAVEVGLFAFAALCMGTMGSTQLAAHQIALQIVSVAFMVPAGMSYAITMR IGQHYGAGQLLEARLAGRVGIGFGALVMLGFAAVLWLFSHPLISLFLDQNDPAFRDVINLAVSLLAVAAWFELFDGVQTIAMGCIRGLKDAKTTFLVGLG CYWLIGAPAAWLMAFNLGWGPTGVWWGLALGLACAAVSLTWAFERKMKRMIRQEPETHRGFQAAQPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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