Pseudomonas sp. PAMC 25886, MUM_RS0102845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004488, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTTTCTCTACCGCACCGCGATGAACCTGGTGATTGACGGCAAGCGCTACACGGCGCTGCGTCAGATGGAATCTTTAGACGTGCTGGAAGGCGATGAGCG TTTTTTCAGCCCCCCCCCCCAGGCCGACATTGACCACAAGCAGCGCCTGGACCTGGTGCGCCAGGCTCTGGATGAGCTGTCTCCTGTCTGCCGCGAGAGC TTTTACTTGCGCAAGCTTGAGGGCATGTCCCATCCGCAGATCGCCGACCGCCTGGGTATTTCCAAAGGCATGGTGGAGAAATACATCGTCAATGCCATGA AACATTGCCGGCTTCGCATGCGTGAGTGGGACGCAAACTGACCGGCAACCTGGCAGCCAGTTAAATTTCTTTTCATTGTCCTCGTTCTTATTCAACAGAC GACCTGTGCCGGGATTACACGTGTGTAATTGACCCGTGTGCCCGCCAGGTTAACCAGGCTTTCCCTCCTGTAGCAGAGGGCTTATCCAGAGGACACTGGA
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| DNA Sequence for Gene |
>MUM_RS0102845
ATGACACAGGCAATTGCATCGCCCGCCGTTCACGACCTGATCGGTATCGGGTTCGGCCCCTCGAACCTGGCGCTGGCCATCGCCCTGCAGGAACGCGAGA AAGCCCAGGGCAAGCTGGATGTTCTGTTTCTCGACAAGCAGGCCGACTACCGCTGGCACGGCAACACCCTGGTCGCCCAGAGTGAATTGCAGATTTCGTT CCTTAAGGACCTGGTGACCCTGCGCAACCCCACCAGCCCGTATTCGTTCGTCAATTACCTGAAAGCCCACGGTCGCCTGGTGGATTTCATCAACCTGGGC ACCTTTTATCCATGCCGCATGGAGTACAACGACTACCTGCGCTGGGTCTCCGGGCAGTTCCAGGCGCAGAGCCGTTATGGTGAGGAAGTGCTGGCCATCG AACCGATCCTGCATCAGCAGCAGGTCGAGGCGCTGCGGGTGATTTCCCGGGATGGCCAGGGTGAGCAACACGTGCGTACCACCCGTTCGGTGGTGGTCAG CGCCGGTGGCACGCCGCGTATTCCCGAGTCTTTCAAGGGGCTCAAGGAGGACGGACGGGTGTTCCATCATTCCCAGTATCTGGAGCGCATGGCCAAGCAG CCATGTGTGGACGGCAAGCCGATGCGCGTCGCGATCATCGGCGGCGGGCAGAGTGCGGCCGAGGCCTTCATTGATCTGAACGACAGTTTTCCGTCGGTGC AGGTCGACATGATCCTGCGCGGCTCGGCCCTCAAGCCTGCGGACGACAGCCCGTTCGTCAACGAAGTGTTCTCGCCGGAATTCACCGACCTGGTGTTCCA GCAGAACGGCAGTGAGCGTGAGCGCCTGGTCAACGAGTACCACAACACCAACTATTCGGTGGTGGACCTGGACCTGATCGAGCGCATCTACGGGATCTTC TACCGCCAGAAAGTCTCCGGCATTGCCCGTCATGCGTTCCGCACCCTGACCACCGTGGAAAAAGCCACGGCCGGGCCGCTGGGGGTCGAGTTGGCATTGC GCAACAACGCCACCGGCGAAACCAGTCTCAACCACTACGACGCCGTGGTGCTGGCCACCGGGTATGAACGCCAGATGCATCGCCAGTTGCTGGCACCGTT GGCGGACTACATGGGCGACTTCGAAGTCAGCCGCGACTACCGCATCGTCACCGACGAGCGCTGCAAGGCCGGCATCTACATGCAGGGTTTCAGCCAGGCC AGCCATGGCTTGAGCGATACGTTGCTGTCGATCCTGCCGATCCGTGCCGACGAGATTGCCGCGTCGCTGTACGAGCACGACCGCAGCCGCGGCAAGGGGC GTTCAGTGCAGGATTTGCTACTGGCCACCGCCAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGGCTGCACTTGAACCCCGGGGCTTGCTGCTGATACTGTACAAAAAACCAGTATCGGTAGAAGCCCCATGCAGTTGATCGAAAAACTCAGCATCCTCGC CGACGCCGCCAAGTACGACGCCTCCTGCGCCAGCAGCGGCGCCCCCAAGCGCAGCTCGGAAGGCAAGGCGGGGCTGGGTTCCACCGATGGCATGGGCATC TGCCACAGCTATACGCCCGATGGTCGCTGCGTGTCCCTGCTCAAGGTATTGCTGACCAACTTCTGCCTCTACGACTGCCAATACTGCGTCAACCGCCGCT CCAGCGACGTGCCCCGTGCACGCTTCAGCCCGGAGGAGGTGGTGACCCTGACCCTCGACTTCTATCGGCGCAACTGCGTCAGCGGGCTGTTTCTCAGCTC CGGCATCATCCGTTCGGCCGACTACACCATGGAGCAGTTGGTGCGGGTCGCCAAGCTCCTGCGCGAAGAGCATGACTTTCGCGGCTACATCCACCTCAAG
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| Amino Acid Sequence |
>L-ornithine 5-monooxygenase
MTQAIASPAVHDLIGIGFGPSNLALAIALQEREKAQGKLDVLFLDKQADYRWHGNTLVAQSELQISFLKDLVTLRNPTSPYSFVNYLKAHGRLVDFINLG TFYPCRMEYNDYLRWVSGQFQAQSRYGEEVLAIEPILHQQQVEALRVISRDGQGEQHVRTTRSVVVSAGGTPRIPESFKGLKEDGRVFHHSQYLERMAKQ PCVDGKPMRVAIIGGGQSAAEAFIDLNDSFPSVQVDMILRGSALKPADDSPFVNEVFSPEFTDLVFQQNGSERERLVNEYHNTNYSVVDLDLIERIYGIF YRQKVSGIARHAFRTLTTVEKATAGPLGVELALRNNATGETSLNHYDAVVLATGYERQMHRQLLAPLADYMGDFEVSRDYRIVTDERCKAGIYMQGFSQA SHGLSDTLLSILPIRADEIAASLYEHDRSRGKGRSVQDLLLATAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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