Pseudomonas sp. PAMC 25886, MUM_RS0101190 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PAMC 25886 ctg7180000004483, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCAGGCGATCATGGAAGTCAACTTCGAGTACATCAACTCGGAAGTGAACCCGGCCATGGCCAATATCGTCGGCCCCAGCGAAGCCATTGTGGTCTCCACC TTCCACATCGAGCTCGATGGCGGTGGCGGCGACCTGCACGTGACCATGCCGTACTCGATGATCGAGCCGGTGCGCGAGATGCTCGATGCGGGCTTCCAGT CCGACCTCGACGACCAGGACGAACGCTGGGTCAAGGCCCTGCGCGAAGACCTGCTGGACGTCGACGTGCCCCTGAGCGCCACCGTGGCCCGTCGCCAGCT GCGTTTGCGGGATATTTTGCACATGCAGCCGGGGGACGTGATTCCCGTCGAACTGCCGGAAGAACTGATCATGCGCGCCAACGGCGTGCCGTCGTTCAAG GTCAAGCTCGGCTCTCACAAAGGCAACCTCGCGTTGCAAGTGATTGAGCCGATCAACCGTCGCTGATCCACACTAATTTCTGCTCCGCCGAGGACATGTA
DNA Sequence for Gene
>MUM_RS0101190 |fliN
ATGGCTACTGAACACGAAAACACTTCCGCCGAAGACCAGGCCCTGGCTGACGAGTGGGCGGCTGCCCTGGAAGAAACCGGCGACGTCGGCCAGGACGATA TCGACGCTCTGTTGGCGGCCGATGCGGCCACCGCACCGGTGGGTAATCGCATCCCCATGGAAGAGTTCGGCAGCGTGCCGAAGAACAACGAGCCGGTAAC CCTGGATGGTCCGAACCTGGATGTGATCCTCGATATCCCGGTGTCGATCTCCATGGAAGTCGGCAGCACCGAAATCAACATCCGCAACCTGCTGCAACTC AACCAGGGTTCGGTGATCGAGCTGGACCGCCTGGCCGGCGAGCCGCTGGACGTGCTGGTCAACGGCACACTGATCGCCCATGGCGAAGTGGTGGTGGTCA ACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGCCCGAGCGAACGCATCAAGAAGTTGCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TATGAAGCGCTCATTGGTAGGACTGTTATCGACGCTGCCCTTGAGCGCAATGGCAGCAGAGCCGGTCGCCCAGGCGGCCGCGCCGGCGCTGGGCAGTGGC GTCGGCGGGCAATTGACGCAGTTGGTGCTGGGTTTGTTGCTGGTGGTGGGGCTGATCTTCGTGCTCGCCTGGGTGCTGCGCCGCGTACAACGCATCGGCC CGGGCAATGCGCAGGTCATCGAGCTGGTGGGTTCACGAGCCCTGGGCCCGCGGGACCGGCTGGTGCTGGTGCAAGTCGGTGACGAACAGATTCTGCTGGG CATCACCCCCGGCCGCATCACCCCGTTGCACGTGCTCAAGACGCCTGTGGAAGTGGCCCAGACTCAAGCGGCCACGCCGGAATTCGCCCAGCGCCTCATG GAGTTGCTGGGCAAGGATCAGAAGGATAAGAAGTAATGCGCGTTTTATTGACGCTCATGCTGTTGCTGGCAGCGCCGCTGGCGTACGCGGCGGACCCGTT
Amino Acid Sequence
>flagellar motor switch protein FliN
MATEHENTSAEDQALADEWAAALEETGDVGQDDIDALLAADAATAPVGNRIPMEEFGSVPKNNEPVTLDGPNLDVILDIPVSISMEVGSTEINIRNLLQL NQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site