Pseudomonas sp. PAMC 25886, MUM_RS0100295
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 25886 ctg7180000004482, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCCGCCGAACGCCTGTGCGGGTTGAAGAGCCGGACCTTCCTTGCCGAACTGATGCCGCATTACCCGATCTACGTGCCGCTGTTGCCGGACGCCGCCCAG GAAGCCATGGGCCAGGTGCACCCGCGGGCGCAGATCACCTTCGACATCCTGATGCGCGAAGGCTTCGAGACCGACCATTACATCGACATCTTCGACGGCG GCCCCACGCTGCACGCACGGGTGTCGGGCATTCGCTCGATCGCCCAGAGCCGTGTGGTGCCGGTGAAGATCGGCGAGATGGCCAAGGGTGTCGGCCGCCA GTACCTGGTCAGCAACGGCCAGTTGCAGGATTACCGCGCAGTGATGCTGGAGCTGGACTACGCGCCCGGCAAGCCAGTGACCCTGGACCTGGAAACCGCC GAGGCCCTGGGCGTTGGCGAAGGCGCGAGCGTGCGCCTGGTAGCGGTATAAACAGAGTTTCGCGGGTGGCTGACAACAGCGGCCCGTTTGAGGAGATAGC
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| DNA Sequence for Gene |
>MUM_RS0100295
ATGATCGTTCGTCCCGTACGCAGCAGCGATTTACCGGCCCTGATTGATCTGGCGCGCAGCACCGGCACCGGCCTCACCACCTTGCCGGCCAACGAAGAGC GCCTGACCCACCGGGTCGGCTGGGCTGAAAAGACCTTTCGCGGCGAAGCCGGGCGCGGTGATGCAGACTACCTGTTCGTGCTGGAAAACGACGAAGGCCG CGTGGTGGGGATTTCCGCCATCGCCGGTGCCGTTGGCCTGCGCGAGCCCTGGTACAACTTCCGGGTGGGCCTGACGGTCAGTGCTTCCCAGGAGCTGAAC ATCTACCGGGAAATCCCGACGCTGTTTCTGGCCAACGACCTGACCGGCAACTCCGAGCTGTGCTCGCTGTTCCTGCACGCCGATTACCGCAACGGCCTTA ACGGCCGCATGCTGGCCAAGGCGCGCATGCTGTTTATCGCGGAATTCCCGCAGCTGTTCGGTAACAAGATCATCGCCGAAATGCGTGGCATGTCTGACGA GGCCGGGCGTTCGCCGTTCTGGGAAAGCCTGGGCCGGCACTTCTTCAAGATGGAATTCAGCCAGGCCGACTACCTTACCGGTGTGGGCAACAAGGCGTTC ATCGCCGAGCTGATGCCGAAGTTTCCGCTGTACACCTGCTTCCTGTCCGAAGACGCGCGCAACGTGATCGGCAAGGTCCATACCGACACCGAGCCGGCCT TGAGCATGCTCAAGAGCGAAGGCTTCAGCTACCAGGGTTACGTCGACATCTTCGACGCAGGCCCGGCGGTGGAGTGTGAAACCACCAAGATCCGCGCGGT ACGCGACAGCGAAGCGCTGGTGCTGGCGATTGGCACGCCGGGCGACGACGCCACGCCGTTCCTGATCCATAACCGTAAACGTGAAGATTGCCGCATCACC GCAGCACCGGCGCGGTTGGCTGCCGGCACCCTGGTGGTCGATCAGCAGACCGCCAAGCGCCTGCAACTGATCGCCGGTGATCAAGTGCGTGCCGTACCGT TGTCCGCTGCCCGGGAGTCGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAATTCGTTGTATATCGCAGGTAGCTGGCTGGCTGGCCAGGGTGACGTGGTTGAATCGCTTAACCCGGTGACCCAGCAGGTGGTGTGGTCGGGGAACAG CGCGACTGCCGAGCAGGTCGAGTCCGCCGTTCAGGCCGCGCGCCAGGCGTTCCCGGCTTGGGCCAAGCGTTCCCTGGAGGAGCGCCTGAGCGTGCTGGAA GCCTTCGCCGCCAACCTGAAAAGCCGTGCCGACGAACTCGCCCGCTGCATCGGTGAGGAAACCGGCAAGCCTTTGTGGGAGTCGGCCACCGAAGTCACCA GCATGGTCAACAAGGTTGCGATCTCGGTGCAAAGCTACCGTGAACGTACCGGCGAGAAGAGCGGCCCATTGGGCGACGCCACGGCCGTTTTGCGTCACAA ACCCCACGGTGTGGTGGCGGTGTTCGGCCCTTACAACTTCCCGGGTCACTTGCCTAACGGGCATATCGTGCCGGCCTTGCTGGCGGGTAACACCGTGCTG
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| Amino Acid Sequence |
>arginine succinyltransferase
MIVRPVRSSDLPALIDLARSTGTGLTTLPANEERLTHRVGWAEKTFRGEAGRGDADYLFVLENDEGRVVGISAIAGAVGLREPWYNFRVGLTVSASQELN IYREIPTLFLANDLTGNSELCSLFLHADYRNGLNGRMLAKARMLFIAEFPQLFGNKIIAEMRGMSDEAGRSPFWESLGRHFFKMEFSQADYLTGVGNKAF IAELMPKFPLYTCFLSEDARNVIGKVHTDTEPALSMLKSEGFSYQGYVDIFDAGPAVECETTKIRAVRDSEALVLAIGTPGDDATPFLIHNRKREDCRIT AAPARLAAGTLVVDQQTAKRLQLIAGDQVRAVPLSAARESK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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