Pseudomonas sp. PAMC 26793, D109_RS0129615
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 26793 ctg7180000039331, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCCGGGCCAGCTTTCCGGCGGCCAGCAGCAGCGTGTGGCGATTGCCCGTGCGCTGGCGATGGACCCGATCGTCATGCTGTTCGACGAACCGACCTCGG CCCTCGACCCGGAAATGGTCAACGAAGTACTCGACGTGATGGTGCAACTGGCCCAGGAAGGCATGACCATGATGTGCGTGACCCACGAAATGGGTTTCGC CCGCAAGGTAGCCGACCGGGTGATCTTCATGGACGCCGGCAAGATCATCGAAGACTGCCCGAAAGAGGAATTCTTCGGCGACATCAGCGCCCGCTCCGAG CGTGCGCAGCACTTCCTTGAGAAAATCCTGCAGCACTAAAAAGCCGCAGCTCACTGCTCTTCTGTAGGAGCGAGCTTGCTCGCGAAAGACGTCAACGATA ACGCGATCATCCTGGATGAGCGCGGTGCCCTTGCGTTTTTCGCGAGCAAGCTCGCTCCTACAGTTGGCAAGTGAGCGATAGCTGACCCAAGGCATCTGTG
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| DNA Sequence for Gene |
>D109_RS0129615
ATGAAATGCGACCCCAACCTCTTTCGCGCCGCGCCGCCATCACTTGCCGTGAAGCCTCGTCTGATTCGCCAGTTGTTCCTGCCGCCACTGATTATCGCCC TGATGATCGGACTGGGTTACGTCGGCTTCTGGATCAGTGAGTTCTATGGGATCCGCACCCTCAGCGATACCGGCGAACGCCAGCTGGAATTGCACGCTCG CACCGTCGAGAGCGAGCTCAGCAAATACACCTACCTGCCCAGTCTCCTGGAGCTGGAATCCAGCGTCTCCAAGCTGTTGGCCGACCCGAATCAAGAAACC CGCAAAACCGTCAACGACTACCTCGAAGGCCTGAACCGGCGCAGTCGCAGCCGGGCGATTTACGTGATGGACACCACCGGCCGCGTGCTGGCAACCAGTA ACTGGCGCGACGCCGACAGTTACCAAGGTGAAGACCTGTCATTCCGTGCCTATTTCCAGAATGCCGTGCGCGGCCAACCCGGCCGGTTCTACGGTATCGG CAGCACCAACGGCGAACCCGGCTATTACCTGGCCCATGGCCTGGAAGAACACGGCAAGATCATCGGCGTTGCCGTGGTCAAGGTACGCCTGGAGGCGCTC GAAGAGCGCTGGCAGCGGGCGCGCCTGGAGGCCTTCGTCAGTGACGAGAACGGCATCATCATTCTCTCCAGCGACCCGGCCCGTCGCCTCAAGTCCGTGC GACCACTGAGCGATGACACCAAGGACCGCCTCGCCCACAGCCTGCAATATTACTGGGCGACGCTCAACGAGCTGGAACCACTGGCCCGCGAGCGTCTCGA TGAAGGCACCGAGAAATTGACCTTCCCGGCCAACAGCGAAGTGGTGGCAGACGAGCATGAGGTCAGCTACCTGGCGCAGACCCGTCCACTGAACGACACC CCCTGGAATTTCACCCTGCTCACCCCGCTGAACGATCTGCGCCGGGCCGCCATCAACCAGGGAATCCTGGTGGCAGTGGCCTTTGCACTGGTGGCATTCC TGCTGATTGCCTGGAACGAGCGCCGCAAGGTGATCGCCACCCGCCTCGCCGCCCGGGAAGCCCTGCAGGAAGCCAATAACCAGCTGGAGCGACGGATTGC CGAACGCACCACCGACCTGCGGGCCAGCAACGAGCGGCTCAAGAGCCAGATTCGCGAGCGGCGCCAGGCCGAGGAAACCCTGCGCCGCGCCCAGGACGAA CTGGTGCAGGCCGGCAAACTCGCGGCCATCGGCCAGATGTCCACCAGCATCGCCCACGAATTGAACCAGCCACTGGCCGCCTTGCGCACCCTGTCGGGTA ACACCGTGCGTTTCCTTGAGCGTGGGGCGCTGGACACCGCCAGTGCCAACCTCAAGACCATCAACGAACTGATCGACCGCATGGGCCGCATCACCGCCAG CCTGCGCTCCTTTGCCCGGCGCGGTGATGATCAGGGCGAAGCCAACCTGGGCAAGGCGGTGGACGCTACGTTCCAGATCCTCGGCAGTCGCCTGGAAACC TTGCCACTGACGGTGCACCGCCACTTCACCAGCGCGCAATTGCAGATCGACCAGACGCGCCTGGAGCAGATCCTGGTCAACCTGATCGGCAACGCCCTGG ACGCCATGCAGGCGCAACCGGCCCCCGAGCTGTGGCTGGAAGGCGACATCGTCGACGGCAAATACCGCCTGCAGGTGCGCGATAACGGCCACGGTATTGA TCCCGAAGCCCGCAAGCATTTGTTCGAACCGTTCTTTACCACCAAACCCGGCGAACAAGGCCTGGGCCTGGGCCTGACGCTGTCGGCCAGTCTCGCGGCC GCCACCGGCGGCAACCTTGCCGTCGAGCACCCGGCCAGCGGTGGTACTGCCTTTGTCCTGAGTTTGCCGCTGGCGAGCCCTCAACAAGTCGAGTCGAAAT GA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCAGAAAAAAATACCGACCTGACAGTCCTGATCGTCGAAGACGACCCCCATGTACTGCTCGGCTGCCAGCAAGCCCTGGCCCTGGAAGACATTCCCAG CGTGGGCGTGGCCAGTGCCGAAGAAGCCCTGACCCGTGTCGGCGAAAACTTCGCCGGCATCGTCATCAGCGATATTCGCCTGCCGGGCATTGACGGCCTG GAGCTGCTGACTCGCCTCAAAGCCTTGGATAAAAGCCTGCCGGTGGTACTGATCACCGGCCATGGCGATATTTCCATGGCCGTGGGCGCGATGCGCAACG GCGCCTATGACTTCATGGAAAAACCCTTCTCACCCGAGCGTCTGGTGGACGTTGCCCGTCGCGCCCTGGAGCAACGCGGGCTGGCCCGGGAAGTCTGGTC GCTGCGTCGGCAACTGGCCGAGCGCGACTCCCTCGAAGGCCGAATCATCGGCCGCTCCCCGGCCATGCAAAACCTGCGGGAGTTGATCGCCAACGTCGCC
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| Amino Acid Sequence |
>sensor histidine kinase
MKCDPNLFRAAPPSLAVKPRLIRQLFLPPLIIALMIGLGYVGFWISEFYGIRTLSDTGERQLELHARTVESELSKYTYLPSLLELESSVSKLLADPNQET RKTVNDYLEGLNRRSRSRAIYVMDTTGRVLATSNWRDADSYQGEDLSFRAYFQNAVRGQPGRFYGIGSTNGEPGYYLAHGLEEHGKIIGVAVVKVRLEAL EERWQRARLEAFVSDENGIIILSSDPARRLKSVRPLSDDTKDRLAHSLQYYWATLNELEPLARERLDEGTEKLTFPANSEVVADEHEVSYLAQTRPLNDT PWNFTLLTPLNDLRRAAINQGILVAVAFALVAFLLIAWNERRKVIATRLAAREALQEANNQLERRIAERTTDLRASNERLKSQIRERRQAEETLRRAQDE LVQAGKLAAIGQMSTSIAHELNQPLAALRTLSGNTVRFLERGALDTASANLKTINELIDRMGRITASLRSFARRGDDQGEANLGKAVDATFQILGSRLET LPLTVHRHFTSAQLQIDQTRLEQILVNLIGNALDAMQAQPAPELWLEGDIVDGKYRLQVRDNGHGIDPEARKHLFEPFFTTKPGEQGLGLGLTLSASLAA ATGGNLAVEHPASGGTAFVLSLPLASPQQVESK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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