Pseudomonas sp. PAMC 26793, D109_RS0126065
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 26793 ctg7180000039322, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGCCCGCATCCGGCATGGTCGCGATGCGCTTGGGTGTGGTGGGGTTCACATGGTCGACCACCGCCAGCGCCGTGCCGGGGCGCCATACGCCACGGCCT GCCTCGCGCAAGCCGCTGAAGGCTTGCGGGCTGGTGTATTCATTGATTACCTGACGGTCGATGTACAGCAGCACATGGCCCTGGTCATCCAGGCGGCACA CCGTGTGGGAGTCGATGTGTTTGTCGTAGAGGGTTCTGGCAGCAGTCATTATTGGGCTCGCTCAACGGTATGACTCCATCATAGGCAGCGCCCCTGCCCC ATCAATCCCACCTTGGTGATGACTCGAAACATGTTTCGTGTTGCATGAATGGCTATCCGAAACATTTTCTTTCATATCCACCTTAGGGTTTTGCATTTCT CATCCGTCTTAACTTAGATACAGCCGCTCGCGTCAGCAAAAGCTACGGGTGGCGTTTTCCGGGCCTTTACCGCCTCTCTCCGATCAAGACCCTCATTCAC
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| DNA Sequence for Gene |
>D109_RS0126065
ATGTCGAAGAAGTCACGCTCAAAACTCTGGTTTCTCGTGCACAGCTGGCTGGCCTTGCCCATCTGGTTCTTTGTGCTGATCGTCTGTGTCACCGGCACCC TGGCGGTGGTCAGCCAGGAAATCGTCTGGCTGGCCAACCCGGACATCCGCGCCAGCAAGCCATCGGACGATGCCGAACCGCTCACCTACGACCAAGTGAT CGGCGCCATCAAGCGCGCCGAACCCCAGGTGATCGTCGAGTCCCTGAGCCGTCCGGATGAGTCGCACTTTGCCCTCAGCGCCAACCTCAGCTATCCCGAT GGGCGCTCGCTGGAGGTCTACGTGAACCCTTATACCGGGGTGATCCAGGGCATCAGCCCGGCGTTCAACTTCCAGGCATTTACCCGTGCACTCCACGGCT GGTGGCTGGTGCCCTTCACCAACGGTTACAGCTGGGGCTGGTACCTGGTGTCGTTGCTGGGCTTGCCGCTGTTGGCGTCGCTGGTCACCGGCCTTGTGGT CTACAAACGTTTCTGGAAAGGCTTTTTCAAGCCGACCCTGCGCTTCAACCATGGCGCGCGCATCTTCTGGGGCGACTTCCACCGATTGAGCGGCATCTGG TCGATCTGGTTTATCGCGGTGATCTCCATCACCGGCACCTGGTTCCTGATCGAGGCGACCCTCAGCGATAACCAGATCACCCTTTCCAGCGAGCCGATCG TCCCGGCGATTGCCCGCGACAAAGTGCCGATGTCCGCAGCGGGCGTACCGGCACCCATGATTCCACTGGACGAGGCGATCAGTATCGCCACCCAACGTAT CCCGGGGCTTGAGGCCAGCTTTGTGAGCCTGCCCAGCAACGCTTACAGCCACCTGCGCATCGGCGGGCGTGGCTGGTACCCGCTGATGTTCCAGACTGCG GAAATCAACCCGTACAACGGCGAAATCGCCGTCTCGCACCTGCTGTCCGACCGTTCGGCCCTGGAGTTCGTCACCGAATCCATGCGCCCCCTGCACACCG GGGATTTTGGCGGCCTCTGGATCAAGTTGATCTGGGCCTTCTTTGGCCTGGTGTTGAGCATGATGGTCTTGAGCGGCCTGCTGATCTGGACCAAACGCAC GGCCCTGGCGACCCTCAACGCCCTGAAACGTGAAGCCAAGGCATCCCGGCAACCGGCAAAAACCCAGGTCTTGCAGGCTGAAACCACGGAGGGCAATCAA TGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACAAGGCCATGACGGTTCAACCGCCCTCGCCACTGCGGGCCTTCTGGCTCAAGTGGCGCTTCCACATCAATATCCTGCTGTTGCTGGTGCCCCTGGGCTT TATGCCCAAGTACTTTGCCGACGCGGCGCTGTTTCGCGGCGACAGCGGCCTGGGCGAACGGGAAGTCGGCGAAGTACAGGTCGGCCCCTGGAGCCTGAAG CTCGCCGAGCTGCGCAACGAGCCACCGCGCCCCGACCCGGCGGGCCCGATGAAATCCTTCAATGCCGCCCTGTGCGCCACCTGCATCGACCAGGTCAAGG CCACCTACCTGCGCATCGGCAAGCCCCGCAGCCTGCGGGCCGCCGGGGTGATTTTCTTCGGTACCCCGTACCGCATGGGCGCCATGCTGCCGATCCCCGA ACGCACACCACTGGACGCCGACGTGTGGATCACCATGGAAGGCTGGGACGGCGCCATGCACCAGGCCTCCATCCCCTTGAGCCAGGCATCGCCGGCCACC
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| Amino Acid Sequence |
>peptidase
MSKKSRSKLWFLVHSWLALPIWFFVLIVCVTGTLAVVSQEIVWLANPDIRASKPSDDAEPLTYDQVIGAIKRAEPQVIVESLSRPDESHFALSANLSYPD GRSLEVYVNPYTGVIQGISPAFNFQAFTRALHGWWLVPFTNGYSWGWYLVSLLGLPLLASLVTGLVVYKRFWKGFFKPTLRFNHGARIFWGDFHRLSGIW SIWFIAVISITGTWFLIEATLSDNQITLSSEPIVPAIARDKVPMSAAGVPAPMIPLDEAISIATQRIPGLEASFVSLPSNAYSHLRIGGRGWYPLMFQTA EINPYNGEIAVSHLLSDRSALEFVTESMRPLHTGDFGGLWIKLIWAFFGLVLSMMVLSGLLIWTKRTALATLNALKREAKASRQPAKTQVLQAETTEGNQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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