Pseudomonas sp. PAMC 26793, D109_RS0124370
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 26793 ctg7180000039321, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGTCGTCATCCTCCGGCTCGGCGGCAGCGGCTGCCGCAGCGGCGGCCTTCTGCTCACGGCGGGCCCTGGAGGCACGCTCGATGGGCCAGCGGATCAGCA CAAACACCAGGTACACGCCAAACGCGATCATGGAATACATGAACAGATCGGAAATCGCCCGCCAGGCGTTGTTGCCGACCTTGAGCACCAGGTCCAGGGC GGTGATGGCCACGGCCGGGGCGAACTGAGTCTTCACCGGGTCGACAATGGTCGGGCTGAACAGCAGCACCGCCATCAGCAGCCGCAGCGGTTCGCGCAGC CAGCGCCACATCCAGCGGGTCATGGCAAACCACACCAACAGGCAACCCAGGGCTGCGAAGGCGTAGAGGCCCCAAGCGATCAGATAGTCGTTCTCGGTCA TGGTGTCCATGGCAAGGTAGGCAAACAGGCCGCTATGATAACGGCTTTTCAGTGCCGAGGCTGCAATGCCGTCGGCCAACCGCCAGACAGAGAGTGATCC
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| DNA Sequence for Gene |
>D109_RS0124370
ATGCCCCCAGCGACCCACATCACTGCCGCCCCGATCGCCCGCAAGGCCCCCGGCACCGACCCGTACGCCTGGCTGCAAGCGCGGGACAGCGCCGAGGTGC TCGATTACCTCAAGGCGGAAAATGCCTGGCAAGAAGCTCAACTGTCCGACCAACAGGCGCTGCGCGAAACCCTGTTCGAAGAGATCAAGGGCCGCATCCT CGAAACCGACCTGTCCCTGCCCTCGCCTTGGGGCCCGTACCTGTATTACACCCGCACCACCGCCGGTGACGAATATGCCCGCCACTACCGCTGCCCGCGC CCGGCGGATGACAGCCAACAGGTCGACGAAAGCGCGGAAGAGCTGCTGCTGGACCCGAACGTGTTGGCCAATGGAGGCTTTTTCTCCCTCGGCGCCTTCA GCATCAGCCCCGACCACCAGCGCCTGGCCTACAGCCTGGACACCAACGGCGAAGAGATTTACACCCTCTACGTGAAGGAATTGGCCACCGGCAAGGTCAG CGAACTGGAGTTCGAAGACTGCGACGGCAGCATGACCTGGGCCAACGACAGCCTGACCTTGTTTTTCACTGAACTGGACGACACCCACCGCCCCCACAAA CTGTATCGCTATCGCCTGGACGGTACCGCCGCCGAAGAAGTGTTCCACGAGCCCGACGGCCGTTTCTTCCTGCACTGCTACCGCTCAAGCTCCGAGCGCC AGTTGCTGCTGGCCCTGGGCAGCAAGACCACCAGCGAGATCTGGGCCCTGGACGCCGAGCAGCCGCAGCAGGCCTTTACCTGCCTGGCGCCACGGGTCGA AGGCCATGAATATGACGTCGACCACGGCAAGCTGGACGACCAGTGGACCTGGTTTATCCGCAGCAACCGCGACGGCATCAACTTCGCCCTGTTCCAGGCC GCCGACACCGGCAGCGTGCCGACCCAGGACGACTGGCAGAACCTGATCCCCCACGACGACGCAGTGATGTTGGATGGCGTGAGCCTCAACGCCCGGGCCA TGACCCTGAGCCTGCGCATCGGTGGTTTGCCGATCATCGAAGTGCACCCACAAGGCCAAGCGCCTTATAGGGTGGAATTGCCGGACGCGGCCTACAGCCT CTACGTGCAGAACAGCCTGGAATTTGCCAGCGACAAAATCCGCCTGCGCTATGAGGCCCTGAACCGCCCGGCCCAGGTGCGTCAGCTGGAACTGGCCAGC GGCGCGCAACAGGTGCTCAAGGAAACCCCGGTGCTCGGTGTGTTCAACGCCGACGACTACGTCAGCCAACGGTTGTGGGCGACGTCGGCCGATGGCACTC AGGTGCCGATCAGTCTTGTCGTCCGCCGCGACCAGTTGGGTAAGCCGACGCCGCTGTACCTGTACGGCTACGGCGCCTATGGCCAGAGCCTCGACCCGTG GTTCTCCCACGCGCGCCTGAGCCTGCTGGACCGTGGCGTGGCCTTTGCCATTGCCCATGTGCGCGGCGGCGGCGAACTGGGCGAAGCCTGGTACCGCGCC GGCAAGCAGGAGCACAAGCAAAATACCTTCAGCGACTTTATCGCCTGCGCCGAACACCTGATCGCCCAGGGCCTGACCACCTCCAAGCAACTGGCTATCA GCGGCGGCAGCGCCGGCGGCCTGTTGATCGGTGCAGTGCTCAATCAGCGCCCGGAGCTGTTCCAGGCGGCCATTGCCGAAGTGCCGTTCGTCGACGTGCT CAACACCATGCTCGACCCTGAATTGCCATTGACCATCACCGAGTATGACGAATGGGGCAACCCTGAAGAGCCAGAGGTGTATGAGCGGATCAAGGCTTAC GCGCCGTACGAAAACGTCAGCGCCCAGGCCTACCCGCCCACGCTGGTGATCGCCGGCTATAACGACAGCCGCGTGCAATATTGGGAAGCGGCCAAGTGGG TGGCCAAGCTGCGCGACACCAAGACCGACGATAACCTGCTGCTGCTCAAGACCGAGCTAAGTGCGGGCCACGGCGGCATGAGTGGGCGTTACCAGGGATT ACGTGAAGTAGCACTCGAATATGCATTTGTTTTCAAGGCGCTGGGGCTGATTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAACTCCGCCTGGCGGGCGGGTCTGAACACCTGACCGCCGGGCGCGCCCTGCACGATTTATGGACAAAGACTGTAAGCCTCATGCCAGAACCGACCTTA CTCAATAACGAAATCCGCGACATGCTGATGGATTGCGGCCTCTTCGACCCGTTGCTGCCGGAAGATTTCCATGTGGCGGCGGGCTATTTCAACATCAGCA GCATCGCCCGCGATGAAGTGATATTCCTCGAGGGCGACGCCGGCACCTTCATGTGCATCATCCACTCAGGCCAGGTGGCGGTGCAGAAAACCAACCATGA AGGCCAGCGGCTGACCATCGCCACCTTGCGCAGTGGGCGGGCCTTTGGCGAGATGGCCGTGCTGGATGGCGAGCGCCGTTCCGCCAGCTGTGTGGCGGCC AGCGATTGCGTGCTGTTGAACCTGGGCAAGGATTCCCTGGAAAAAATGCTCAACGATGCGCCGAAAATCGCGGCCAAGATAATCCGTGCGATTGCTATCG
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| Amino Acid Sequence |
>peptidase S9
MPPATHITAAPIARKAPGTDPYAWLQARDSAEVLDYLKAENAWQEAQLSDQQALRETLFEEIKGRILETDLSLPSPWGPYLYYTRTTAGDEYARHYRCPR PADDSQQVDESAEELLLDPNVLANGGFFSLGAFSISPDHQRLAYSLDTNGEEIYTLYVKELATGKVSELEFEDCDGSMTWANDSLTLFFTELDDTHRPHK LYRYRLDGTAAEEVFHEPDGRFFLHCYRSSSERQLLLALGSKTTSEIWALDAEQPQQAFTCLAPRVEGHEYDVDHGKLDDQWTWFIRSNRDGINFALFQA ADTGSVPTQDDWQNLIPHDDAVMLDGVSLNARAMTLSLRIGGLPIIEVHPQGQAPYRVELPDAAYSLYVQNSLEFASDKIRLRYEALNRPAQVRQLELAS GAQQVLKETPVLGVFNADDYVSQRLWATSADGTQVPISLVVRRDQLGKPTPLYLYGYGAYGQSLDPWFSHARLSLLDRGVAFAIAHVRGGGELGEAWYRA GKQEHKQNTFSDFIACAEHLIAQGLTTSKQLAISGGSAGGLLIGAVLNQRPELFQAAIAEVPFVDVLNTMLDPELPLTITEYDEWGNPEEPEVYERIKAY APYENVSAQAYPPTLVIAGYNDSRVQYWEAAKWVAKLRDTKTDDNLLLLKTELSAGHGGMSGRYQGLREVALEYAFVFKALGLI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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