Pseudomonas sp. PAMC 26793, D109_RS0123710
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 26793 ctg7180000039320, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCAATACGGCTTGAGCCCGGTCACCGCCGGTTACTACACCGCTGCCTGTGTGTTCGGCGGCAGCCTGATGCGGCCTTTGGGCGGCGCCCTGGCCGACC GTTTTGGCGGGATTCGCACCCTGCTCGGCATGTACGGCGTGGCCGCGATCTGCATCGCGGCGGTGGGGTTCAACCTGCCAAGTTCCTACGCCGCCCTGGC GCTTTTCGTCTGCACCATGCTCGGCTTGGGGGCCGGTAACGGCGCAGTGTTCCAACTGGTACCCCAGCGTTTCCATCGGGAGATCGGTGTCATGACCGGC CTGATCGGCATGGCCGGCGGCATCGGCGGTTTCGCCCTCGCGGCGGGCATGGGTGCGATCAAGCAAAGCACCGGCAGCTATCAGTTGGCACTGTGGTTGT TCGCCAGCCTGGGCGTGCTGGCCTGGTTCGGCCTGTATGGCGTCAAGCGTCGCTGGAGAACCACGTGGGGCTCGGCAGCGGTGACGGCTGCCCGGGTCTG
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| DNA Sequence for Gene |
>D109_RS0123710
ATGAGCCTGCAACTGAGCTTCGCCCAGGCCAGCGCCACCGGCCCTCGGCAGGAAAACCAGGACGCCTTGCGCCTGGTTACGCCGGCCCCGGAGCTGGCCG CCAGCAAAGGCTACCTGTGCGCCATCGCCGACGGCGTCAGCCAATGCGCCGATGGCGGACTGGCCGCGCGCTCGACCTTGCAGGCCCTGGCCCTGGACTA CTACGCCACGCCGCAAACCTGGGGCGTGGCCCAGGCGCTGGAACGCTTGCTGGTGGCACAGAATCGCTGGCTGCAAGCCAACGGTGGCGGCCAACCGTTG CTGACCACCCTTAGCGCCCTGGTGTTTCGCGGCCAGCGTTTCACCCTGGCCCATGTGGGTGATTGCCGGGTGTATCGCTGGCTCGATGGCAAGCTGCAAC GCCTCAGCGAAGAACACGTGTGGGAGCAACCGGGCATGCAACATGTGCTCAAGCGCGCCATGGGCCTGGATCAACATCTGGTACTGGATTTCCTCGACGG CGAGCTACGGGCAGGTGAGTGTTTTCTCCTGCTCAGCGACGGCGTGTGGGCGACCCTCGATGACAACCGCATCAGCGCAATCCTGCGGGAACAGTCGGAC CTGAACCTCGCGGTCAACACCTTGGTCAGCACCGCGCATCTGGCGGGCAGCCAGGACAATGCCAGTGCCCTGCTGGTGCGCGTCGACCAGCTCGGCGCTG CCACCCTGGGTGATGCACTGGTGCAATTGCAGCAATGGCCGCTGCCACCGCCCTTGAAAGTCGGGCAGCGCTTCGAAGGCTGGCAGGTGGAAGCGCTGCT GGGGCAAAGTCGCCAATCCCTGCTCTACCGGGTACGCGATGCCCAGCAACAGGCGTGGCTGCTGAAGACCTTGCCGGTCAGCCACGACGATGACGTATTC GCCGCCCAGGCATTGCTGTCGGAGGAATGGTTCCTGCGTCGGGTGGCCGGCCGTGCGTTTCCTGAAGTCCATCCGGCCAGTGGTCGCCAGCATTTGTACT ACGTGATGCGTGAATACGCCGGGCAAACCCTGGCTGAGCTGTTCAAGCACCAGGGCCCATTGCCCTTGGCGCAGTGGCAATCCCTGGCCGAGCGCCTGTT GCGTGCTATCGGGATGCTGCACCGCCGGCAGATCCTGCACCGCGACATCAAGCCGGAAAACCTGCTGCTGGGCGAGGACGGCGAATTGCGCGTGCTGGAC TTCGGCCTGGCCTACTGCCCCGGGCTTTCCGAGGATCGCGCACACCTGCTGCCTGGCACGCCGAGCTTTATCGCCCCGGAAGCCTTCAACGGCGAACGCC CTACCCCGCAGCAGGATTTGTATAGCGTCGGGGTGACCTTGTATTACCTGCTCACCGGGCATTATCCCTACGGCGAAATCGAAGCGTTCCAGCGCCCCCG GTTCACCGCGCCTGTCAGCGCCAGCCGTTACCGCCCCGACCTGCCCGACTGGCTGCAACAAAGTCTGGAGCGCGCCGTCGCCGCGCAACCCGAGCAACGT TATGAAACCGCCGAGGAGTGGCTGCTGGTAATGGAACAGGCGGATCGCCGCGAGTTGAGCATTCGGCCAAAACCGCTGCTGGAGCGCGAACCGTTGAAGG TCTGGCAGACGTTGGCCGTGCTGTCGTTGCTGATCAATCTGGTGCTGTTGTACTGGCTGTTGCACCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGGCGAAATATCTCGAGACATAGGCGCCAAACCGAACACATCCGGCCAAACCGCCACTTGGCACAACCACTGCATTAGCTTTTCCATCAACACACATAT AGCCGCACCTTCAACGTCGAAGGTCGAGCTTCCCGAGAGAACGGGACCAGGACAAAGGCGTCCTCGCTACTTACCTAGCGGGGACGCCTTTTTTTGTTGC GCACGATTTGTCGAGCCACTGCGGAGAACGACATGAAGAAACTCAAACTGGTGATGATCGGCAACGGCATGGCCGGGGTTCGCACCCTTGAAGAATTGCT CAAGCTGAGCAGCGACCTGTACGACATCACCGTCTTCGGCGCCGAGCCCCACACCAATTACAACCGCATCCTGCTCTCGCCGGTGCTGGCGGGTGAGCAG ACCTTCGAAGAGATCGTGCTCAACGACTTGAGCTGGTACCTCGATAACAACATCAAGTTGCTGCTCAATCGCAAAGTGGTGCAGATCGACCGGGTCAAAC
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| Amino Acid Sequence |
>protein kinase
MSLQLSFAQASATGPRQENQDALRLVTPAPELAASKGYLCAIADGVSQCADGGLAARSTLQALALDYYATPQTWGVAQALERLLVAQNRWLQANGGGQPL LTTLSALVFRGQRFTLAHVGDCRVYRWLDGKLQRLSEEHVWEQPGMQHVLKRAMGLDQHLVLDFLDGELRAGECFLLLSDGVWATLDDNRISAILREQSD LNLAVNTLVSTAHLAGSQDNASALLVRVDQLGAATLGDALVQLQQWPLPPPLKVGQRFEGWQVEALLGQSRQSLLYRVRDAQQQAWLLKTLPVSHDDDVF AAQALLSEEWFLRRVAGRAFPEVHPASGRQHLYYVMREYAGQTLAELFKHQGPLPLAQWQSLAERLLRAIGMLHRRQILHRDIKPENLLLGEDGELRVLD FGLAYCPGLSEDRAHLLPGTPSFIAPEAFNGERPTPQQDLYSVGVTLYYLLTGHYPYGEIEAFQRPRFTAPVSASRYRPDLPDWLQQSLERAVAAQPEQR YETAEEWLLVMEQADRRELSIRPKPLLEREPLKVWQTLAVLSLLINLVLLYWLLHH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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