Pseudomonas sp. PAMC 26793, D109_RS0117260
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 26793 ctg7180000039311, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGTGACGCTGCCAGTGCAGCTTCAGCGGGATAGGTACTTTTGCATAACCGTAGCCCGGAAGGTCGACCAGACGCCGATCATCGTCTAGCTTGAAGAAGT TGAGGAGCTGTGTGCGCCCCGGGGTTTTCGAGGTGCGGGCCAGGCTGGCGTGGGTCAGGGTGTTCAGCGCGCTGGATTTGCCGGCGTTGGAACGGCCGGC GAAGGCGACTTCGAAGCCTTCGTCATCGGGGCATTGGTCGACTTTGGCGGCGCTGAGCATGAAGGTGGACTGTTGGCACAGGCCGAGGATGGGATTCTTG AGTTGCATGAGTTTTCCGATGTGGGCGGTGCCGGGAATAGGTGCGGCAAGCGGTGTCGTTTCCGTTTCAGTAGCGCCAGTATATAATGCCGCAGATTTTG TGTGTGCTTTGTCCCAGCGAAGGATGAAGTTCACGGGAGCGATAGACCTTTATTGCGCATTAGAACGCAAAACGCTCTCAAACCCTGAAAAGGTCGATGT
|
|
| DNA Sequence for Gene |
>D109_RS0117260
ATGACCAAGTGGCTGCTAGCCGTCGGTGTCTTGATGCCACTTTACAGTGCTCAGGCTACACAGGAACCGGAGGCTGTGTACAACCGTGTTTGCGGGGCCT GCCATGCCCGACAGTTGCCCAACGCCCCGAAACGGGGTGACCAGGCAGCCTGGAAGCCAAGATTGGCTCAAGGTATGGACACGCTGGTGCAACACGTGAC CCAGGGTTTCAAGGCGATGCCGCCGCGTGGTTTGTGCATGGACTGCAGTACCGAGGATTACCATGCCGTCATTCAGTTGATGGTGAGTAAACCCGGTCCA TAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTCTTTAACCCTTAGCCGTAGTTGGATTAGCTGATGAACAAACTGATCGTGAGTCTGCTGTTGACCTTGGGCATCACCGGTGTTGCCCATGCCGCAGGCG ACGCCACTGCCGGCCAGGCGAAAGCCGCCGTATGTGGTGCTTGCCATGGACCGGACGGTAATAGCCCGGCGCCAAACTTTCCAAAACTGGCCGGCCAGGG TGAGCGTTACCTGACCAAGCAGATGCACGACATCAAGGACGGCAAGCGTACGGTCCTGGAAATGACCGGCTTGTTGACCAACCTCAGCGATCAGGACCTG GCGGATATCGCGGCGTATTTTGCCAGCCAAAAGGGCAGCGTGGGGGCTGCTGATCCGAAATTGGTGGCCCGCGGTGAAGAACTGTTCCGTGGCGGCAACC TGGAAAAAGGCATGCCTTCCTGCATCGGTTGCCACTCGCCTAACGGCGCGGGCCTCGCTGCTGCTGGCTTCCCGCACTTGAGCGGCCAACATGCCCAGTA
|
|
| Amino Acid Sequence |
>cytochrome
MTKWLLAVGVLMPLYSAQATQEPEAVYNRVCGACHARQLPNAPKRGDQAAWKPRLAQGMDTLVQHVTQGFKAMPPRGLCMDCSTEDYHAVIQLMVSKPGP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|